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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
SNQALYEKLEQTRTILSVKLAELINITTIADAQENSELAVATTSVVNNQTQLIKNVQDLL
ILTRSIKEKWLLNQI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3r84-a19-m1-cN 76 75 1.0000 0.9868 1.0000 3.59e-46 3r84-a19-m1-cL_3r84-a19-m1-cN
2 3r84-a19-m1-cL 76 75 1.0000 0.9868 1.0000 3.59e-46 3r84-a19-m1-cL_3r84-a19-m1-cN
3 3r84-a19-m1-cH 75 75 1.0000 1.0000 1.0000 3.93e-46 3r84-a19-m1-cF_3r84-a19-m1-cH
4 3r84-a19-m1-cD 75 75 1.0000 1.0000 1.0000 3.93e-46 3r84-a19-m1-cF_3r84-a19-m1-cD
5 3r84-a19-m1-cF 74 74 0.9867 1.0000 1.0000 1.38e-45 3r84-a19-m1-cF_3r84-a19-m1-cD, 3r84-a19-m1-cF_3r84-a19-m1-cH
6 2oux-a1-m1-cA 246 70 0.3067 0.0935 0.3286 5.5 2oux-a1-m1-cB_2oux-a1-m1-cA
7 2oux-a1-m1-cB 245 70 0.3067 0.0939 0.3286 5.6 2oux-a1-m1-cB_2oux-a1-m1-cA
8 8eym-a1-m1-cA 319 28 0.1333 0.0313 0.3571 6.8 8eym-a1-m1-cA_8eym-a1-m1-cB
9 4pz1-a1-m2-cA 97 23 0.1600 0.1237 0.5217 7.2 4pz1-a1-m1-cA_4pz1-a1-m2-cA
10 4pz1-a1-m1-cA 97 23 0.1600 0.1237 0.5217 7.2 4pz1-a1-m1-cA_4pz1-a1-m2-cA
11 8eym-a1-m1-cB 331 26 0.1333 0.0302 0.3846 7.4 8eym-a1-m1-cA_8eym-a1-m1-cB
12 4mer-a1-m1-cD 97 23 0.1600 0.1237 0.5217 8.2 4mer-a1-m1-cA_4mer-a1-m1-cD, 4mer-a1-m1-cC_4mer-a1-m1-cD
13 4mer-a1-m1-cA 96 23 0.1600 0.1250 0.5217 8.5 4mer-a1-m1-cA_4mer-a1-m1-cD
14 4mer-a1-m1-cC 88 23 0.1600 0.1364 0.5217 9.0 4mer-a1-m1-cC_4mer-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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