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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=37)
SNTIGARLNRVEDKVTQLDQRLALITDMLHQLLSLHG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3bj4-a1-m2-cA 37 37 1.0000 1.0000 1.0000 1.55e-20 3bj4-a1-m2-cA_3bj4-a1-m2-cB
2 3bj4-a1-m2-cB 38 37 1.0000 0.9737 1.0000 1.84e-20 3bj4-a1-m2-cA_3bj4-a1-m2-cB
3 3hfe-a1-m1-cC 26 26 0.7027 1.0000 1.0000 3.16e-12 3hfe-a1-m1-cB_3hfe-a1-m1-cC
4 3hfe-a1-m1-cB 26 26 0.7027 1.0000 1.0000 3.16e-12 3hfe-a1-m1-cB_3hfe-a1-m1-cC
5 7e5a-a1-m1-cA 465 27 0.2432 0.0194 0.3333 6.9 7e5a-a1-m1-cA_7e5a-a1-m1-cB
6 6fws-a1-m1-cB 683 28 0.2973 0.0161 0.3929 6.9 6fws-a1-m1-cB_6fws-a1-m1-cA
7 6fws-a1-m1-cA 686 28 0.2973 0.0160 0.3929 7.0 6fws-a1-m1-cB_6fws-a1-m1-cA
8 4x4w-a1-m1-cA 398 22 0.2973 0.0276 0.5000 7.1 4x4w-a1-m2-cB_4x4w-a1-m1-cA
9 4x4w-a1-m2-cB 397 22 0.2973 0.0277 0.5000 7.4 4x4w-a1-m2-cB_4x4w-a1-m1-cA
10 7cyd-a1-m1-cC 964 29 0.2703 0.0104 0.3448 7.9 7cyd-a1-m1-cB_7cyd-a1-m1-cC
11 7cyd-a1-m1-cB 964 29 0.2703 0.0104 0.3448 7.9 7cyd-a1-m1-cB_7cyd-a1-m1-cC
12 1ou5-a1-m1-cB 344 22 0.2973 0.0320 0.5000 8.1 1ou5-a1-m1-cA_1ou5-a1-m1-cB
13 1ou5-a1-m1-cA 344 22 0.2973 0.0320 0.5000 8.1 1ou5-a1-m1-cA_1ou5-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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