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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
SNTLTVQILDKEYCINCPDDERANLESAARYLDGKREIRSSGKVIGADRVAVAALNITHD
LLHRKERLDQESSSTRERVRELLDRVDRA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1t3u-a1-m1-cB 91 89 1.0000 0.9780 1.0000 6.83e-60 1t3u-a1-m1-cD_1t3u-a1-m1-cB
2 1t3u-a1-m1-cD 89 89 1.0000 1.0000 1.0000 7.66e-60 1t3u-a1-m1-cD_1t3u-a1-m1-cB
3 1w2e-a1-m2-cA 89 88 0.9888 0.9888 1.0000 3.45e-59 1w2e-a1-m2-cA_1w2e-a1-m2-cB
4 1w2e-a1-m1-cA 89 88 0.9888 0.9888 1.0000 3.45e-59 1w2e-a1-m1-cA_1w2e-a1-m2-cB
5 1t3u-a1-m1-cC 90 87 0.9775 0.9667 1.0000 2.56e-58 1t3u-a1-m1-cA_1t3u-a1-m1-cC
6 1t3u-a1-m1-cA 90 87 0.9775 0.9667 1.0000 2.56e-58 1t3u-a1-m1-cA_1t3u-a1-m1-cC
7 1w2e-a1-m2-cB 89 87 0.9775 0.9775 1.0000 2.72e-58 1w2e-a1-m1-cA_1w2e-a1-m2-cB, 1w2e-a1-m2-cA_1w2e-a1-m2-cB
8 4p1m-a1-m2-cA 106 86 0.2809 0.2358 0.2907 1.00e-06 4p1m-a1-m2-cA_4p1m-a1-m2-cB
9 4p1m-a1-m1-cA 106 86 0.2809 0.2358 0.2907 1.00e-06 4p1m-a1-m1-cA_4p1m-a1-m2-cB
10 4p1m-a1-m2-cB 107 85 0.2809 0.2336 0.2941 3.19e-06 4p1m-a1-m1-cA_4p1m-a1-m2-cB, 4p1m-a1-m1-cB_4p1m-a1-m2-cB, 4p1m-a1-m2-cA_4p1m-a1-m2-cB
11 4p1m-a1-m1-cB 107 85 0.2809 0.2336 0.2941 3.19e-06 4p1m-a1-m1-cB_4p1m-a1-m2-cB
12 3bnj-a1-m2-cA 471 27 0.1348 0.0255 0.4444 1.2 3bnj-a1-m1-cA_3bnj-a1-m2-cA
13 3bnj-a1-m1-cA 471 27 0.1348 0.0255 0.4444 1.2 3bnj-a1-m1-cA_3bnj-a1-m2-cA
14 4ybn-a1-m1-cA 214 26 0.1348 0.0561 0.4615 3.0 4ybn-a1-m1-cB_4ybn-a1-m1-cA
15 6uut-a1-m1-cA 460 63 0.2022 0.0391 0.2857 4.2 6uut-a1-m1-cB_6uut-a1-m1-cA
16 6uut-a1-m1-cB 432 63 0.2022 0.0417 0.2857 5.1 6uut-a1-m1-cB_6uut-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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