Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
SNTQAERSIIGMIDMFHKYTRRDGKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEK
KDKNEDKKIDFSEFLSLLGDIATDYHKQSHGAAPCS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4aqj-a1-m2-cA 96 96 1.0000 1.0000 1.0000 6.98e-69 4aqj-a1-m1-cA_4aqj-a1-m2-cA
2 4aqj-a1-m1-cA 96 96 1.0000 1.0000 1.0000 6.98e-69 4aqj-a1-m1-cA_4aqj-a1-m2-cA
3 1nsh-a1-m1-cB 101 95 0.3333 0.3168 0.3368 3.51e-10 1nsh-a1-m1-cA_1nsh-a1-m1-cB
4 1nsh-a1-m1-cA 101 95 0.3333 0.3168 0.3368 3.51e-10 1nsh-a1-m1-cA_1nsh-a1-m1-cB
5 2luc-a1-m1-cB 105 97 0.3438 0.3143 0.3402 3.66e-10 2luc-a1-m1-cA_2luc-a1-m1-cB
6 2luc-a1-m1-cA 105 97 0.3438 0.3143 0.3402 3.66e-10 2luc-a1-m1-cA_2luc-a1-m1-cB
7 6zdy-a1-m2-cA 108 95 0.2917 0.2593 0.2947 5.75e-10 6zdy-a1-m1-cA_6zdy-a1-m2-cA
8 6zdy-a1-m1-cA 108 95 0.2917 0.2593 0.2947 5.75e-10 6zdy-a1-m1-cA_6zdy-a1-m2-cA
9 2wcf-a3-m1-cE 90 92 0.2604 0.2778 0.2717 8.88e-09 2wcf-a3-m1-cF_2wcf-a3-m1-cE
10 2wcb-a1-m1-cB 91 92 0.2604 0.2747 0.2717 9.89e-09 2wcb-a1-m1-cB_2wcb-a1-m1-cA
11 2wcb-a1-m1-cA 92 92 0.2604 0.2717 0.2717 1.03e-08 2wcb-a1-m1-cB_2wcb-a1-m1-cA
12 1qls-a1-m2-cA 95 87 0.3125 0.3158 0.3448 1.34e-08 1qls-a1-m1-cA_1qls-a1-m2-cA
13 1qls-a1-m1-cA 95 87 0.3125 0.3158 0.3448 1.34e-08 1qls-a1-m1-cA_1qls-a1-m2-cA
14 1gqm-a2-m1-cI 87 89 0.2708 0.2989 0.2921 2.58e-08 1gqm-a2-m1-cG_1gqm-a2-m1-cI
15 1gqm-a2-m1-cG 87 89 0.2708 0.2989 0.2921 2.58e-08 1gqm-a2-m1-cG_1gqm-a2-m1-cI
16 1gqm-a1-m1-cD 87 89 0.2708 0.2989 0.2921 2.58e-08 1gqm-a1-m1-cC_1gqm-a1-m1-cD
17 1gqm-a1-m1-cC 87 89 0.2708 0.2989 0.2921 2.58e-08 1gqm-a1-m1-cC_1gqm-a1-m1-cD
18 1j55-a1-m2-cA 88 88 0.2812 0.3068 0.3068 2.91e-08 1j55-a1-m1-cA_1j55-a1-m2-cA
19 1j55-a1-m1-cA 88 88 0.2812 0.3068 0.3068 2.91e-08 1j55-a1-m1-cA_1j55-a1-m2-cA
20 2wcf-a3-m1-cF 88 89 0.2604 0.2841 0.2809 4.24e-08 2wcf-a3-m1-cF_2wcf-a3-m1-cE
21 5hyd-a2-m1-cC 94 84 0.2500 0.2553 0.2857 5.86e-07 5hyd-a2-m1-cC_5hyd-a2-m1-cD
22 5hyd-a2-m1-cD 96 84 0.2500 0.2500 0.2857 7.47e-07 5hyd-a2-m1-cC_5hyd-a2-m1-cD
23 4ybh-a1-m2-cB 89 87 0.2708 0.2921 0.2989 1.72e-06 4ybh-a1-m1-cB_4ybh-a1-m2-cB
24 4ybh-a1-m1-cB 89 87 0.2708 0.2921 0.2989 1.72e-06 4ybh-a1-m1-cB_4ybh-a1-m2-cB
25 1k9k-a2-m2-cB 89 87 0.2708 0.2921 0.2989 1.72e-06 1k9k-a2-m1-cA_1k9k-a2-m2-cB, 1k9k-a2-m1-cB_1k9k-a2-m2-cB, 1k9k-a2-m2-cA_1k9k-a2-m2-cB
26 1k9k-a2-m2-cA 89 87 0.2708 0.2921 0.2989 1.72e-06 1k9k-a2-m2-cA_1k9k-a2-m2-cB
27 1k9k-a2-m1-cB 89 87 0.2708 0.2921 0.2989 1.72e-06 1k9k-a2-m1-cB_1k9k-a2-m2-cB
28 1k9k-a2-m1-cA 89 87 0.2708 0.2921 0.2989 1.72e-06 1k9k-a2-m1-cA_1k9k-a2-m2-cB
29 2rgi-a1-m1-cA 93 95 0.2500 0.2581 0.2526 1.34e-05 2rgi-a1-m1-cB_2rgi-a1-m1-cA
30 2rgi-a1-m1-cB 92 95 0.2500 0.2609 0.2526 1.38e-05 2rgi-a1-m1-cB_2rgi-a1-m1-cA
31 3nxa-a2-m1-cC 97 93 0.2812 0.2784 0.2903 1.68e-05 3nxa-a2-m1-cD_3nxa-a2-m1-cC
32 4duq-a1-m1-cA 88 91 0.2396 0.2614 0.2527 2.18e-05 4duq-a1-m1-cA_4duq-a1-m1-cB
33 4duq-a1-m1-cB 90 93 0.2396 0.2556 0.2473 2.49e-05 4duq-a1-m1-cA_4duq-a1-m1-cB
34 2cnp-a1-m1-cB 90 87 0.2500 0.2667 0.2759 6.22e-05 2cnp-a1-m1-cA_2cnp-a1-m1-cB
35 2cnp-a1-m1-cA 90 87 0.2500 0.2667 0.2759 6.22e-05 2cnp-a1-m1-cA_2cnp-a1-m1-cB
36 1jwd-a1-m1-cB 90 87 0.2500 0.2667 0.2759 6.22e-05 1jwd-a1-m1-cA_1jwd-a1-m1-cB
37 1jwd-a1-m1-cA 90 87 0.2500 0.2667 0.2759 6.22e-05 1jwd-a1-m1-cA_1jwd-a1-m1-cB
38 1cnp-a1-m1-cB 90 87 0.2500 0.2667 0.2759 6.22e-05 1cnp-a1-m1-cA_1cnp-a1-m1-cB
39 1cnp-a1-m1-cA 90 87 0.2500 0.2667 0.2759 6.22e-05 1cnp-a1-m1-cA_1cnp-a1-m1-cB
40 1a03-a1-m1-cB 90 87 0.2500 0.2667 0.2759 6.22e-05 1a03-a1-m1-cA_1a03-a1-m1-cB
41 1a03-a1-m1-cA 90 87 0.2500 0.2667 0.2759 6.22e-05 1a03-a1-m1-cA_1a03-a1-m1-cB
42 4p2y-a3-m3-cB 88 83 0.2396 0.2614 0.2771 8.25e-05 4p2y-a3-m1-cB_4p2y-a3-m3-cB
43 4p2y-a3-m1-cB 88 83 0.2396 0.2614 0.2771 8.25e-05 4p2y-a3-m1-cB_4p2y-a3-m3-cB
44 1k8u-a1-m2-cA 87 81 0.2604 0.2874 0.3086 1.17e-04 1k8u-a1-m1-cA_1k8u-a1-m2-cA
45 1k8u-a1-m1-cA 87 81 0.2604 0.2874 0.3086 1.17e-04 1k8u-a1-m1-cA_1k8u-a1-m2-cA
46 6wn7-a3-m1-cE 91 85 0.2396 0.2527 0.2706 2.71e-04 6wn7-a3-m1-cF_6wn7-a3-m1-cE
47 2llt-a1-m1-cB 92 84 0.2083 0.2174 0.2381 3.83e-04 2llt-a1-m1-cA_2llt-a1-m1-cB
48 2llt-a1-m1-cA 92 84 0.2083 0.2174 0.2381 3.83e-04 2llt-a1-m1-cA_2llt-a1-m1-cB
49 6wn7-a3-m1-cF 88 88 0.2812 0.3068 0.3068 4.10e-04 6wn7-a3-m1-cF_6wn7-a3-m1-cE
50 2egd-a1-m1-cA 86 89 0.2292 0.2558 0.2472 5.67e-04 2egd-a1-m1-cA_2egd-a1-m1-cB
51 2kax-a1-m1-cB 92 88 0.2812 0.2935 0.3068 6.92e-04 2kax-a1-m1-cA_2kax-a1-m1-cB
52 2kax-a1-m1-cA 92 88 0.2812 0.2935 0.3068 6.92e-04 2kax-a1-m1-cA_2kax-a1-m1-cB
53 2ki6-a1-m1-cC 96 89 0.2292 0.2292 0.2472 7.09e-04 2ki6-a1-m1-cC_2ki6-a1-m1-cD
54 2ki6-a1-m1-cD 97 89 0.2292 0.2268 0.2472 7.21e-04 2ki6-a1-m1-cC_2ki6-a1-m1-cD
55 1k2h-a1-m1-cB 93 84 0.1979 0.2043 0.2262 7.91e-04 1k2h-a1-m1-cA_1k2h-a1-m1-cB
56 1k2h-a1-m1-cA 93 84 0.1979 0.2043 0.2262 7.91e-04 1k2h-a1-m1-cA_1k2h-a1-m1-cB
57 2egd-a1-m1-cB 91 89 0.2292 0.2418 0.2472 8.15e-04 2egd-a1-m1-cA_2egd-a1-m1-cB
58 1yut-a1-m1-cB 98 85 0.2188 0.2143 0.2471 0.003 1yut-a1-m1-cA_1yut-a1-m1-cB
59 1yut-a1-m1-cA 98 85 0.2188 0.2143 0.2471 0.003 1yut-a1-m1-cA_1yut-a1-m1-cB
60 1yus-a1-m1-cB 98 85 0.2188 0.2143 0.2471 0.003 1yus-a1-m1-cA_1yus-a1-m1-cB
61 1yus-a1-m1-cA 98 85 0.2188 0.2143 0.2471 0.003 1yus-a1-m1-cA_1yus-a1-m1-cB
62 5k89-a2-m3-cH 89 85 0.2188 0.2360 0.2471 0.003 5k89-a2-m1-cH_5k89-a2-m3-cH
63 5k89-a2-m1-cH 89 85 0.2188 0.2360 0.2471 0.003 5k89-a2-m1-cH_5k89-a2-m3-cH
64 2y5i-a3-m1-cE 97 84 0.2083 0.2062 0.2381 0.004 2y5i-a3-m1-cE_2y5i-a3-m1-cF
65 2y5i-a3-m1-cF 98 84 0.2083 0.2041 0.2381 0.005 2y5i-a3-m1-cE_2y5i-a3-m1-cF
66 4pcw-a2-m1-cD 88 84 0.2292 0.2500 0.2619 0.006 4pcw-a2-m1-cD_4pcw-a2-m1-cC
67 1qx2-a5-m1-cA 75 70 0.2188 0.2800 0.3000 0.007 1qx2-a5-m1-cB_1qx2-a5-m1-cA
68 1qx2-a3-m2-cA 75 70 0.2188 0.2800 0.3000 0.007 1qx2-a3-m1-cB_1qx2-a3-m2-cA
69 4pcw-a2-m1-cC 91 83 0.2292 0.2418 0.2651 0.007 4pcw-a2-m1-cD_4pcw-a2-m1-cC
70 1qx2-a5-m1-cB 74 70 0.2188 0.2838 0.3000 0.008 1qx2-a5-m1-cB_1qx2-a5-m1-cA
71 1qx2-a3-m1-cB 74 70 0.2188 0.2838 0.3000 0.008 1qx2-a3-m1-cB_1qx2-a3-m2-cA
72 2cxj-a1-m1-cB 98 92 0.2500 0.2449 0.2609 0.018 2cxj-a1-m1-cA_2cxj-a1-m1-cB
73 2cxj-a1-m1-cA 98 92 0.2500 0.2449 0.2609 0.018 2cxj-a1-m1-cA_2cxj-a1-m1-cB
74 1ht9-a1-m1-cB 76 71 0.2396 0.3026 0.3239 0.042 1ht9-a1-m1-cA_1ht9-a1-m1-cB
75 1ht9-a1-m1-cA 76 71 0.2396 0.3026 0.3239 0.042 1ht9-a1-m1-cA_1ht9-a1-m1-cB
76 2m0r-a1-m1-cB 104 81 0.2188 0.2019 0.2593 0.086 2m0r-a1-m1-cA_2m0r-a1-m1-cB
77 2m0r-a1-m1-cA 104 81 0.2188 0.2019 0.2593 0.086 2m0r-a1-m1-cA_2m0r-a1-m1-cB
78 4lzk-a1-m1-cD 156 61 0.1354 0.0833 0.2131 0.76 4lzk-a1-m1-cD_4lzk-a1-m1-cA, 4lzk-a1-m1-cE_4lzk-a1-m1-cD
79 4lzk-a1-m1-cE 155 61 0.1354 0.0839 0.2131 0.80 4lzk-a1-m1-cE_4lzk-a1-m1-cD
80 4mk6-a1-m2-cA 183 41 0.1771 0.0929 0.4146 0.81 4mk6-a1-m1-cA_4mk6-a1-m2-cA
81 4mk6-a1-m1-cA 183 41 0.1771 0.0929 0.4146 0.81 4mk6-a1-m1-cA_4mk6-a1-m2-cA
82 4jwq-a1-m1-cA 69 31 0.1250 0.1739 0.3871 0.96 4jwq-a1-m1-cA_4jwq-a1-m1-cC
83 4jwq-a1-m1-cC 73 40 0.1354 0.1781 0.3250 1.0 4jwq-a1-m1-cA_4jwq-a1-m1-cC
84 3mse-a1-m2-cB 168 47 0.1667 0.0952 0.3404 1.1 3mse-a1-m1-cB_3mse-a1-m2-cB
85 3mse-a1-m1-cB 168 47 0.1667 0.0952 0.3404 1.1 3mse-a1-m1-cB_3mse-a1-m2-cB
86 6lkz-a1-m1-cD 482 22 0.1250 0.0249 0.5455 1.4 6lkz-a1-m1-cC_6lkz-a1-m1-cD
87 6lkz-a1-m1-cC 482 22 0.1250 0.0249 0.5455 1.4 6lkz-a1-m1-cC_6lkz-a1-m1-cD
88 4ov2-a6-m1-cB 163 55 0.1771 0.1043 0.3091 1.7 4ov2-a6-m1-cC_4ov2-a6-m1-cB
89 6e1m-a1-m1-cB 533 78 0.2188 0.0394 0.2692 1.9 6e1m-a1-m1-cA_6e1m-a1-m1-cB
90 6e1m-a1-m1-cA 533 78 0.2188 0.0394 0.2692 1.9 6e1m-a1-m1-cA_6e1m-a1-m1-cB
91 3nsl-a3-m1-cC 93 89 0.2083 0.2151 0.2247 2.1 3nsl-a3-m1-cD_3nsl-a3-m1-cC
92 3nsl-a3-m1-cD 92 89 0.2083 0.2174 0.2247 2.3 3nsl-a3-m1-cD_3nsl-a3-m1-cC
93 3pm5-a6-m1-cC 475 77 0.2083 0.0421 0.2597 2.5 3pm5-a6-m1-cD_3pm5-a6-m1-cC
94 3pm5-a6-m1-cD 469 77 0.2083 0.0426 0.2597 2.7 3pm5-a6-m1-cD_3pm5-a6-m1-cC
95 1s6c-a1-m2-cA 165 55 0.1875 0.1091 0.3273 3.6 1s6c-a1-m1-cA_1s6c-a1-m2-cA
96 1s6c-a1-m1-cA 165 55 0.1875 0.1091 0.3273 3.6 1s6c-a1-m1-cA_1s6c-a1-m2-cA
97 4ov2-a6-m1-cC 156 28 0.1250 0.0769 0.4286 5.7 4ov2-a6-m1-cC_4ov2-a6-m1-cB
98 5xop-a1-m1-cB 66 34 0.1458 0.2121 0.4118 7.1 5xop-a1-m1-cF_5xop-a1-m1-cB
99 4ik3-a1-m2-cA 393 56 0.1875 0.0458 0.3214 7.4 4ik3-a1-m1-cA_4ik3-a1-m2-cA
100 4ik3-a1-m1-cA 393 56 0.1875 0.0458 0.3214 7.4 4ik3-a1-m1-cA_4ik3-a1-m2-cA
101 6yns-a4-m1-cF 142 70 0.2083 0.1408 0.2857 8.0 6yns-a4-m1-cG_6yns-a4-m1-cF

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600