Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
SNVVLIGKKPVMNYVLAALTLLNQGVSEIVIKARGRAISKAVDTVEIVRNRFLPDKIEIK
EIRVGSQVVTSQDGRQSRVSTIEIAIRKK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2bky-a1-m1-cB 89 89 1.0000 1.0000 1.0000 5.13e-58 2bky-a1-m1-cA_2bky-a1-m1-cB
2 2bky-a1-m1-cA 89 89 1.0000 1.0000 1.0000 5.13e-58 2bky-a1-m1-cA_2bky-a1-m1-cB
3 1h0x-a1-m1-cB 89 89 1.0000 1.0000 1.0000 5.13e-58 1h0x-a1-m1-cA_1h0x-a1-m1-cB
4 1h0x-a1-m1-cA 89 89 1.0000 1.0000 1.0000 5.13e-58 1h0x-a1-m1-cA_1h0x-a1-m1-cB
5 3wbm-a1-m1-cC 86 89 0.9213 0.9535 0.9213 3.21e-49 3wbm-a1-m1-cA_3wbm-a1-m1-cC
6 3wbm-a1-m1-cA 86 89 0.9213 0.9535 0.9213 3.21e-49 3wbm-a1-m1-cA_3wbm-a1-m1-cC
7 2z7c-a2-m1-cD 92 88 0.5730 0.5543 0.5795 2.18e-33 2z7c-a2-m1-cC_2z7c-a2-m1-cD
8 2z7c-a2-m1-cC 89 88 0.5730 0.5730 0.5795 2.39e-33 2z7c-a2-m1-cC_2z7c-a2-m1-cD
9 1nfj-a1-m4-cA 87 87 0.5955 0.6092 0.6092 1.62e-32 1nfj-a1-m1-cA_1nfj-a1-m4-cA
10 1nfj-a1-m3-cA 87 87 0.5955 0.6092 0.6092 1.62e-32 1nfj-a1-m1-cA_1nfj-a1-m3-cA
11 1nfj-a1-m1-cA 87 87 0.5955 0.6092 0.6092 1.62e-32 1nfj-a1-m1-cA_1nfj-a1-m3-cA, 1nfj-a1-m1-cA_1nfj-a1-m4-cA
12 1nfh-a1-m2-cB 86 87 0.5955 0.6163 0.6092 1.88e-32 1nfh-a1-m1-cA_1nfh-a1-m2-cB
13 1nfh-a1-m1-cA 86 87 0.5955 0.6163 0.6092 1.88e-32 1nfh-a1-m1-cA_1nfh-a1-m2-cB
14 3toe-a1-m1-cB 86 87 0.5506 0.5698 0.5632 2.04e-28 3toe-a1-m1-cA_3toe-a1-m1-cB
15 3toe-a1-m1-cA 86 87 0.5506 0.5698 0.5632 2.04e-28 3toe-a1-m1-cA_3toe-a1-m1-cB
16 4z9e-a2-m1-cD 85 87 0.4607 0.4824 0.4713 1.50e-23 4z9e-a2-m1-cC_4z9e-a2-m1-cD
17 4z9e-a2-m1-cC 85 87 0.4607 0.4824 0.4713 1.50e-23 4z9e-a2-m1-cC_4z9e-a2-m1-cD
18 3u6y-a1-m1-cC 99 90 0.5618 0.5051 0.5556 2.74e-23 3u6y-a1-m1-cA_3u6y-a1-m1-cC
19 3u6y-a1-m1-cA 99 90 0.5618 0.5051 0.5556 2.74e-23 3u6y-a1-m1-cA_3u6y-a1-m1-cC
20 2bky-a1-m1-cY 86 60 0.2697 0.2791 0.4000 2.76e-09 2bky-a1-m1-cX_2bky-a1-m1-cY
21 2bky-a1-m1-cX 86 60 0.2697 0.2791 0.4000 2.76e-09 2bky-a1-m1-cX_2bky-a1-m1-cY
22 1udv-a1-m1-cB 86 60 0.2697 0.2791 0.4000 2.76e-09 1udv-a1-m1-cB_1udv-a1-m1-cA
23 1udv-a1-m1-cA 88 60 0.2697 0.2727 0.4000 2.82e-09 1udv-a1-m1-cB_1udv-a1-m1-cA
24 5uic-a1-m1-cA 120 69 0.1910 0.1417 0.2464 1.2 5uic-a1-m1-cA_5uic-a1-m2-cB
25 5uic-a1-m2-cB 121 69 0.1910 0.1405 0.2464 1.2 5uic-a1-m1-cA_5uic-a1-m2-cB
26 4ian-a1-m1-cB 319 39 0.1685 0.0470 0.3846 2.7 4ian-a1-m1-cB_4ian-a1-m1-cA
27 4ian-a1-m1-cA 321 39 0.1685 0.0467 0.3846 2.9 4ian-a1-m1-cB_4ian-a1-m1-cA
28 8app-a1-m4-cB 189 54 0.1685 0.0794 0.2778 3.2 8app-a1-m2-cD_8app-a1-m4-cB, 8app-a1-m3-cA_8app-a1-m4-cB, 8app-a1-m4-cB_8app-a1-m1-cC
29 8app-a1-m2-cD 188 54 0.1685 0.0798 0.2778 3.3 8app-a1-m2-cD_8app-a1-m1-cC, 8app-a1-m2-cD_8app-a1-m4-cB, 8app-a1-m3-cA_8app-a1-m2-cD
30 8app-a1-m1-cC 190 54 0.1685 0.0789 0.2778 3.3 8app-a1-m2-cD_8app-a1-m1-cC, 8app-a1-m3-cA_8app-a1-m1-cC, 8app-a1-m4-cB_8app-a1-m1-cC
31 8app-a1-m3-cA 187 54 0.1685 0.0802 0.2778 3.5 8app-a1-m3-cA_8app-a1-m1-cC, 8app-a1-m3-cA_8app-a1-m2-cD, 8app-a1-m3-cA_8app-a1-m4-cB
32 2gj2-a5-m5-cB 79 37 0.1461 0.1646 0.3514 6.3 2gj2-a5-m1-cD_2gj2-a5-m5-cB
33 2gj2-a5-m1-cD 79 37 0.1461 0.1646 0.3514 6.3 2gj2-a5-m1-cD_2gj2-a5-m5-cB
34 2gj2-a3-m3-cD 79 37 0.1461 0.1646 0.3514 6.3 2gj2-a3-m1-cA_2gj2-a3-m3-cD
35 2gj2-a3-m1-cA 79 37 0.1461 0.1646 0.3514 6.3 2gj2-a3-m1-cA_2gj2-a3-m3-cD
36 2gj2-a2-m1-cC 79 37 0.1461 0.1646 0.3514 6.3 2gj2-a2-m1-cB_2gj2-a2-m1-cC
37 2gj2-a2-m1-cB 79 37 0.1461 0.1646 0.3514 6.3 2gj2-a2-m1-cB_2gj2-a2-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600