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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=55)
SPDLWKIWLLIDPRRVLIAVFAFLTILGLAIHMILLSTTEFNWLEDGIPAAKVQQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7vrj-a1-m1-cW 55 55 1.0000 1.0000 1.0000 2.00e-34 7vrj-a1-m1-cW_7vrj-a1-m1-cY
2 7vrj-a1-m1-cY 62 55 1.0000 0.8871 1.0000 2.14e-34 7vrj-a1-m1-cW_7vrj-a1-m1-cY
3 5y5s-a1-m1-cY 57 51 0.5273 0.5088 0.5686 3.04e-16 5y5s-a1-m1-c1_5y5s-a1-m1-cY
4 5y5s-a1-m1-c1 56 51 0.5273 0.5179 0.5686 3.10e-16 5y5s-a1-m1-c1_5y5s-a1-m1-cY
5 5y5s-a1-m1-cD 55 51 0.5273 0.5273 0.5686 3.46e-16 5y5s-a1-m1-cA_5y5s-a1-m1-cD
6 5y5s-a1-m1-cA 54 49 0.5273 0.5370 0.5918 5.91e-16 5y5s-a1-m1-cA_5y5s-a1-m1-cD
7 7vrj-a1-m1-cK 43 41 0.4545 0.5814 0.6098 1.83e-12 7vrj-a1-m1-cI_7vrj-a1-m1-cK
8 7vrj-a1-m1-cI 43 41 0.4545 0.5814 0.6098 1.83e-12 7vrj-a1-m1-cI_7vrj-a1-m1-cK
9 7ddq-a1-m1-cg 53 52 0.4364 0.4528 0.4615 1.22e-10 7ddq-a1-m1-cf_7ddq-a1-m1-cg
10 7ddq-a1-m1-cf 53 52 0.4364 0.4528 0.4615 1.22e-10 7ddq-a1-m1-cf_7ddq-a1-m1-cg
11 6zxa-a1-m1-cM 69 50 0.2727 0.2174 0.3000 0.48 6zxa-a1-m1-cK_6zxa-a1-m1-cM
12 6zxa-a1-m1-cK 69 50 0.2727 0.2174 0.3000 0.48 6zxa-a1-m1-cK_6zxa-a1-m1-cM
13 6q53-a1-m1-cD 57 40 0.2000 0.1930 0.2750 0.79 6q53-a1-m1-cA_6q53-a1-m1-cD
14 6q53-a1-m1-cA 54 40 0.2000 0.2037 0.2750 0.79 6q53-a1-m1-cA_6q53-a1-m1-cD
15 7zdi-a1-m1-cQ 48 36 0.1636 0.1875 0.2500 5.7 7zdi-a1-m1-cO_7zdi-a1-m1-cQ
16 7zdi-a1-m1-cO 48 36 0.1636 0.1875 0.2500 5.7 7zdi-a1-m1-cO_7zdi-a1-m1-cQ

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Reference:
Jacob Schwartz et al.

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