Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=57)
SPEFSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3mce-a2-m1-cD 57 57 1.0000 1.0000 1.0000 3.05e-36 3mce-a2-m1-cD_3mce-a2-m1-cC
2 3mce-a2-m1-cC 59 56 0.9825 0.9492 1.0000 4.16e-35 3mce-a2-m1-cD_3mce-a2-m1-cC
3 2j9l-a1-m1-cB 171 46 0.2982 0.0994 0.3696 1.3 2j9l-a1-m1-cB_2j9l-a1-m1-cD
4 2ja3-a2-m1-cC 172 46 0.2982 0.0988 0.3696 1.3 2ja3-a2-m1-cD_2ja3-a2-m1-cC
5 3e90-a3-m1-cB 173 28 0.1754 0.0578 0.3571 3.9 3e90-a3-m1-cD_3e90-a3-m1-cB
6 3e90-a3-m1-cD 167 28 0.1754 0.0599 0.3571 4.1 3e90-a3-m1-cD_3e90-a3-m1-cB
7 7wbc-a1-m1-cB 250 38 0.2456 0.0560 0.3684 6.5 7wbc-a1-m1-cA_7wbc-a1-m1-cB
8 7wbc-a1-m1-cA 250 38 0.2456 0.0560 0.3684 6.5 7wbc-a1-m1-cA_7wbc-a1-m1-cB
9 2ggv-a4-m5-cB 169 28 0.1579 0.0533 0.3214 7.0 2ggv-a4-m4-cB_2ggv-a4-m5-cB
10 2ggv-a4-m4-cB 169 28 0.1579 0.0533 0.3214 7.0 2ggv-a4-m4-cB_2ggv-a4-m5-cB
11 2ggv-a3-m3-cB 169 28 0.1579 0.0533 0.3214 7.0 2ggv-a3-m1-cB_2ggv-a3-m3-cB
12 2ggv-a3-m1-cB 169 28 0.1579 0.0533 0.3214 7.0 2ggv-a3-m1-cB_2ggv-a3-m3-cB
13 1j4a-a1-m1-cB 331 48 0.2807 0.0483 0.3333 9.1 1j4a-a1-m1-cA_1j4a-a1-m1-cB
14 1j4a-a1-m1-cA 331 48 0.2807 0.0483 0.3333 9.1 1j4a-a1-m1-cA_1j4a-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600