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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=40)
SPELQNFLTILEKEEQDKIHQLQKKYNKFRQKLEEALRES

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ymy-a1-m1-cA 40 40 1.0000 1.0000 1.0000 3.39e-22 2ymy-a1-m1-cA_2ymy-a1-m1-cB
2 2ymy-a1-m1-cB 41 40 1.0000 0.9756 1.0000 3.61e-22 2ymy-a1-m1-cA_2ymy-a1-m1-cB
3 7jpu-a1-m1-cD 1155 33 0.3250 0.0113 0.3939 3.3 7jpu-a1-m1-cD_7jpu-a1-m1-cA, 7jpu-a1-m1-cD_7jpu-a1-m1-cC
4 7jpu-a1-m1-cC 1156 33 0.3250 0.0112 0.3939 3.3 7jpu-a1-m1-cD_7jpu-a1-m1-cC
5 7jpu-a1-m1-cA 1156 33 0.3250 0.0112 0.3939 3.3 7jpu-a1-m1-cD_7jpu-a1-m1-cA
6 2bs2-a1-m1-cD 655 34 0.3000 0.0183 0.3529 3.8 2bs2-a1-m1-cA_2bs2-a1-m1-cD
7 2bs2-a1-m1-cA 655 34 0.3000 0.0183 0.3529 3.8 2bs2-a1-m1-cA_2bs2-a1-m1-cD
8 8dsa-a1-m1-cC 320 27 0.2500 0.0312 0.3704 5.2 8dsa-a1-m1-cB_8dsa-a1-m1-cC
9 6kg7-a1-m1-cC 1817 24 0.2000 0.0044 0.3333 6.1 6kg7-a1-m1-cB_6kg7-a1-m1-cC
10 6kg7-a1-m1-cB 1817 24 0.2000 0.0044 0.3333 6.1 6kg7-a1-m1-cB_6kg7-a1-m1-cC
11 5l2p-a1-m1-cC 301 39 0.3500 0.0465 0.3590 6.9 5l2p-a1-m1-cC_5l2p-a1-m1-cA, 5l2p-a1-m1-cC_5l2p-a1-m1-cD
12 7mto-a1-m2-cA 188 31 0.2750 0.0585 0.3548 9.9 7mto-a1-m1-cA_7mto-a1-m2-cA
13 7mto-a1-m1-cA 188 31 0.2750 0.0585 0.3548 9.9 7mto-a1-m1-cA_7mto-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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