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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
SPERGRKRLGIYLAHFLDHVEGHGEIGVQRDALAEDARLGALIDRALADAVARASLNAVL
RD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6hk5-a2-m1-cB 64 62 1.0000 0.9688 1.0000 8.79e-38 6hk5-a2-m1-cC_6hk5-a2-m1-cB
2 6hk5-a4-m1-cD 62 62 1.0000 1.0000 1.0000 9.61e-38 6hk5-a4-m1-cF_6hk5-a4-m1-cD
3 6hk5-a2-m1-cC 61 60 0.9677 0.9836 1.0000 1.15e-35 6hk5-a2-m1-cC_6hk5-a2-m1-cB
4 6hk5-a4-m1-cF 59 58 0.9355 0.9831 1.0000 3.29e-34 6hk5-a4-m1-cF_6hk5-a4-m1-cD
5 4pwa-a2-m3-cB 86 57 0.2581 0.1860 0.2807 1.4 4pwa-a2-m3-cB_4pwa-a2-m3-cD
6 4pwa-a2-m3-cD 87 57 0.2581 0.1839 0.2807 1.4 4pwa-a2-m3-cB_4pwa-a2-m3-cD
7 3ip3-a3-m1-cE 323 22 0.1613 0.0310 0.4545 4.0 3ip3-a3-m1-cE_3ip3-a3-m1-cF
8 3ip3-a3-m1-cF 325 22 0.1613 0.0308 0.4545 4.1 3ip3-a3-m1-cE_3ip3-a3-m1-cF
9 3uf1-a2-m1-cC 105 37 0.2097 0.1238 0.3514 4.2 3uf1-a2-m1-cC_3uf1-a2-m1-cD
10 3uf1-a2-m1-cD 108 37 0.2097 0.1204 0.3514 4.3 3uf1-a2-m1-cC_3uf1-a2-m1-cD
11 6hz4-a1-m1-cM 336 40 0.2097 0.0387 0.3250 5.3 6hz4-a1-m1-cN_6hz4-a1-m1-cM
12 4ga5-a4-m1-cH 493 31 0.1935 0.0243 0.3871 6.5 4ga5-a4-m1-cD_4ga5-a4-m1-cH
13 4ga5-a4-m1-cD 493 31 0.1935 0.0243 0.3871 6.5 4ga5-a4-m1-cD_4ga5-a4-m1-cH
14 3agp-a2-m2-cA 1202 28 0.1935 0.0100 0.4286 8.7 3agp-a2-m1-cA_3agp-a2-m2-cA
15 3agp-a2-m1-cA 1202 28 0.1935 0.0100 0.4286 8.7 3agp-a2-m1-cA_3agp-a2-m2-cA
16 6nbj-a1-m1-cB 378 49 0.2258 0.0370 0.2857 9.7 6nbj-a1-m1-cA_6nbj-a1-m1-cB
17 6nbj-a1-m1-cA 378 49 0.2258 0.0370 0.2857 9.7 6nbj-a1-m1-cA_6nbj-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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