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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=44)
SPKALQQKIHELEGLQHAQNLEFEEAAQIRDQLHQLRELFIAAS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1qoj-a1-m2-cB 44 44 1.0000 1.0000 1.0000 6.62e-25 1qoj-a1-m1-cB_1qoj-a1-m2-cB, 1qoj-a1-m2-cA_1qoj-a1-m2-cB
2 1qoj-a1-m2-cA 44 44 1.0000 1.0000 1.0000 6.62e-25 1qoj-a1-m2-cA_1qoj-a1-m2-cB
3 1qoj-a1-m1-cB 44 44 1.0000 1.0000 1.0000 6.62e-25 1qoj-a1-m1-cB_1qoj-a1-m2-cB
4 1e52-a1-m1-cB 56 46 1.0000 0.7857 0.9565 3.27e-23 1e52-a1-m1-cA_1e52-a1-m1-cB
5 1e52-a1-m1-cA 56 46 1.0000 0.7857 0.9565 3.27e-23 1e52-a1-m1-cA_1e52-a1-m1-cB
6 3j3u-a1-m1-cF 798 38 0.3864 0.0213 0.4474 0.36 3j3u-a1-m1-cD_3j3u-a1-m1-cF
7 3j3u-a1-m1-cD 798 38 0.3864 0.0213 0.4474 0.36 3j3u-a1-m1-cD_3j3u-a1-m1-cF
8 3j3s-a1-m1-cF 798 38 0.3864 0.0213 0.4474 0.36 3j3s-a1-m1-cC_3j3s-a1-m1-cF
9 3j3s-a1-m1-cC 798 38 0.3864 0.0213 0.4474 0.36 3j3s-a1-m1-cC_3j3s-a1-m1-cF
10 3pxg-a1-m1-cC 444 38 0.3864 0.0383 0.4474 0.36 3pxg-a1-m1-cD_3pxg-a1-m1-cC
11 3pxg-a1-m1-cE 434 38 0.3864 0.0392 0.4474 0.38 3pxg-a1-m1-cD_3pxg-a1-m1-cE
12 3pxg-a1-m1-cD 434 38 0.3864 0.0392 0.4474 0.38 3pxg-a1-m1-cD_3pxg-a1-m1-cC, 3pxg-a1-m1-cD_3pxg-a1-m1-cE
13 1rqb-a1-m2-cA 448 31 0.2273 0.0223 0.3226 0.88 1rqb-a1-m1-cA_1rqb-a1-m2-cA
14 1rqb-a1-m1-cA 448 31 0.2273 0.0223 0.3226 0.88 1rqb-a1-m1-cA_1rqb-a1-m2-cA
15 6pt2-a1-m1-cB 361 18 0.2045 0.0249 0.5000 8.2 6pt2-a1-m1-cB_6pt2-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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