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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
SPMDALCRVCHTASPRCLPLFKPLDDPISGKPATLASILSYCSGLEILEAELFLPHHICP
DCVAKLRLSLEFKRSVHRMDRILRQT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6fp5-a1-m1-cB 86 86 1.0000 1.0000 1.0000 2.91e-58 6fp5-a1-m1-cA_6fp5-a1-m1-cB
2 6fp5-a1-m1-cA 84 84 0.9767 1.0000 1.0000 8.52e-57 6fp5-a1-m1-cA_6fp5-a1-m1-cB
3 8f93-a2-m1-cB 304 27 0.1395 0.0395 0.4444 1.8 8f93-a2-m1-cA_8f93-a2-m1-cB
4 8f93-a2-m1-cA 304 27 0.1395 0.0395 0.4444 1.8 8f93-a2-m1-cA_8f93-a2-m1-cB
5 6uoz-a1-m1-cA 304 27 0.1395 0.0395 0.4444 1.8 6uoz-a1-m1-cB_6uoz-a1-m1-cA
6 3ohp-a1-m1-cB 167 26 0.1395 0.0719 0.4615 2.2 3ohp-a1-m1-cD_3ohp-a1-m1-cB
7 7pok-a1-m1-cA 98 80 0.2326 0.2041 0.2500 2.8 7pok-a1-m1-cD_7pok-a1-m1-cA
8 3ihm-a1-m1-cA 408 61 0.2209 0.0466 0.3115 3.0 3ihm-a1-m1-cB_3ihm-a1-m1-cA
9 3ihm-a1-m1-cB 407 61 0.2209 0.0467 0.3115 3.1 3ihm-a1-m1-cB_3ihm-a1-m1-cA
10 4mky-a2-m1-cD 284 24 0.1163 0.0352 0.4167 3.1 4mky-a2-m1-cC_4mky-a2-m1-cD
11 4mky-a2-m1-cC 284 24 0.1163 0.0352 0.4167 3.1 4mky-a2-m1-cC_4mky-a2-m1-cD
12 6uoz-a1-m1-cB 302 27 0.1395 0.0397 0.4444 4.4 6uoz-a1-m1-cB_6uoz-a1-m1-cA
13 3wkx-a1-m2-cA 657 36 0.1628 0.0213 0.3889 4.5 3wkx-a1-m1-cA_3wkx-a1-m2-cA
14 3wkx-a1-m1-cA 657 36 0.1628 0.0213 0.3889 4.5 3wkx-a1-m1-cA_3wkx-a1-m2-cA
15 1mo9-a1-m1-cB 522 19 0.1047 0.0172 0.4737 4.8 1mo9-a1-m1-cA_1mo9-a1-m1-cB
16 1mo9-a1-m1-cA 522 19 0.1047 0.0172 0.4737 4.8 1mo9-a1-m1-cA_1mo9-a1-m1-cB
17 3m5k-a1-m1-cB 162 30 0.1395 0.0741 0.4000 5.4 3m5k-a1-m1-cA_3m5k-a1-m1-cB
18 3m5k-a1-m1-cA 162 30 0.1395 0.0741 0.4000 5.4 3m5k-a1-m1-cA_3m5k-a1-m1-cB
19 7pok-a1-m1-cD 90 80 0.2209 0.2111 0.2375 7.9 7pok-a1-m1-cD_7pok-a1-m1-cA, 7pok-a1-m1-cD_7pok-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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