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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
SPSAPVNVTVRHLKANSAVVSWDVLEDEVVIGFAISQQKKDVRLRFIQEVNTTTRSCALW
DLEEDTEYIVHVQAISIQGQSPASEPVLFKTPR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4lsd-a2-m1-cD 93 93 1.0000 1.0000 1.0000 6.55e-65 4lsd-a2-m1-cC_4lsd-a2-m1-cD
2 4lsd-a2-m1-cC 93 93 1.0000 1.0000 1.0000 6.55e-65 4lsd-a2-m1-cC_4lsd-a2-m1-cD
3 4yfg-a1-m1-cB 481 90 0.2688 0.0520 0.2778 0.002 4yfg-a1-m1-cA_4yfg-a1-m1-cB
4 4yfg-a1-m1-cA 481 90 0.2688 0.0520 0.2778 0.002 4yfg-a1-m1-cA_4yfg-a1-m1-cB
5 5x83-a1-m1-cB 202 96 0.3441 0.1584 0.3333 0.003 5x83-a1-m1-cD_5x83-a1-m1-cB
6 5x83-a1-m1-cD 195 96 0.3441 0.1641 0.3333 0.003 5x83-a1-m1-cD_5x83-a1-m1-cB
7 4bkf-a1-m1-cB 505 91 0.2581 0.0475 0.2637 0.052 4bkf-a1-m1-cA_4bkf-a1-m1-cB
8 4bkf-a1-m1-cA 505 91 0.2581 0.0475 0.2637 0.052 4bkf-a1-m1-cA_4bkf-a1-m1-cB
9 5myb-a1-m1-cA 190 84 0.2366 0.1158 0.2619 0.13 5myb-a1-m1-cA_5myb-a1-m1-cB
10 5myb-a1-m1-cB 191 84 0.2366 0.1152 0.2619 0.13 5myb-a1-m1-cA_5myb-a1-m1-cB
11 3b83-a1-m8-cB 92 81 0.2366 0.2391 0.2716 0.20 3b83-a1-m8-cB_3b83-a1-m2-cA, 3b83-a1-m8-cD_3b83-a1-m8-cB
12 3b83-a1-m4-cF 92 81 0.2366 0.2391 0.2716 0.20 3b83-a1-m4-cF_3b83-a1-m4-cE
13 3b83-a5-m1-cD 91 81 0.2366 0.2418 0.2716 0.21 3b83-a5-m1-cD_3b83-a5-m1-cH
14 3b83-a1-m8-cD 91 81 0.2366 0.2418 0.2716 0.21 3b83-a1-m8-cD_3b83-a1-m8-cB
15 3b83-a1-m5-cD 91 81 0.2366 0.2418 0.2716 0.21 3b83-a1-m5-cD_3b83-a1-m8-cH
16 3b83-a5-m1-cH 94 81 0.2366 0.2340 0.2716 0.24 3b83-a5-m1-cD_3b83-a5-m1-cH
17 3b83-a1-m8-cH 94 81 0.2366 0.2340 0.2716 0.24 3b83-a1-m5-cD_3b83-a1-m8-cH
18 3b83-a1-m2-cA 95 81 0.2366 0.2316 0.2716 0.27 3b83-a1-m2-cA_3b83-a1-m8-cG, 3b83-a1-m8-cB_3b83-a1-m2-cA
19 3t1w-a1-m2-cA 368 80 0.2151 0.0543 0.2500 0.38 3t1w-a1-m1-cA_3t1w-a1-m2-cA
20 3t1w-a1-m1-cA 368 80 0.2151 0.0543 0.2500 0.38 3t1w-a1-m1-cA_3t1w-a1-m2-cA
21 7y8s-a1-m1-cB 288 62 0.1613 0.0521 0.2419 0.41 7y8s-a1-m1-cA_7y8s-a1-m1-cB
22 7y8s-a1-m1-cB 288 89 0.2258 0.0729 0.2360 5.7 7y8s-a1-m1-cA_7y8s-a1-m1-cB
23 7y8s-a1-m1-cA 275 62 0.1613 0.0545 0.2419 0.43 7y8s-a1-m1-cA_7y8s-a1-m1-cB
24 3b83-a1-m8-cG 99 81 0.2366 0.2222 0.2716 0.46 3b83-a1-m2-cA_3b83-a1-m8-cG, 3b83-a1-m2-cE_3b83-a1-m8-cG
25 3b83-a1-m4-cE 99 81 0.2366 0.2222 0.2716 0.46 3b83-a1-m1-cC_3b83-a1-m4-cE, 3b83-a1-m4-cC_3b83-a1-m4-cE, 3b83-a1-m4-cF_3b83-a1-m4-cE
26 3b83-a1-m4-cC 99 81 0.2366 0.2222 0.2716 0.46 3b83-a1-m4-cC_3b83-a1-m4-cE
27 3b83-a1-m2-cE 99 81 0.2366 0.2222 0.2716 0.46 3b83-a1-m2-cE_3b83-a1-m8-cG
28 3b83-a1-m1-cC 99 81 0.2366 0.2222 0.2716 0.46 3b83-a1-m1-cC_3b83-a1-m4-cE
29 3gei-a2-m1-cB 424 40 0.1720 0.0377 0.4000 2.2 3gei-a2-m1-cC_3gei-a2-m1-cB
30 3gei-a2-m1-cC 298 40 0.1720 0.0537 0.4000 2.4 3gei-a2-m1-cC_3gei-a2-m1-cB
31 2ck2-a1-m1-cB 96 90 0.2258 0.2188 0.2333 2.4 2ck2-a1-m1-cA_2ck2-a1-m1-cB
32 6uyk-a1-m1-cB 268 30 0.1505 0.0522 0.4667 4.5 6uyk-a1-m1-cA_6uyk-a1-m1-cB
33 6uyk-a1-m1-cA 255 30 0.1505 0.0549 0.4667 4.8 6uyk-a1-m1-cA_6uyk-a1-m1-cB
34 4lpu-a1-m1-cB 93 75 0.2258 0.2258 0.2800 6.1 4lpu-a1-m1-cA_4lpu-a1-m1-cB
35 4lpu-a1-m1-cA 93 75 0.2258 0.2258 0.2800 6.1 4lpu-a1-m1-cA_4lpu-a1-m1-cB
36 3ics-a1-m1-cB 538 22 0.1290 0.0223 0.5455 6.5 3ics-a1-m1-cB_3ics-a1-m1-cA
37 3ics-a1-m1-cA 539 22 0.1290 0.0223 0.5455 6.7 3ics-a1-m1-cB_3ics-a1-m1-cA
38 8eyr-a1-m1-cB 794 25 0.0968 0.0113 0.3600 9.8 8eyr-a1-m1-cB_8eyr-a1-m1-cA
39 8eyr-a1-m1-cA 795 25 0.0968 0.0113 0.3600 9.8 8eyr-a1-m1-cB_8eyr-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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