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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
SPSFNTLTFSDCDAELRIWSVGLSWIPFFGPGIEGLYTAGLIKNQNNLVCRLRRLANQTA
KSLELLLRVTTEERTFSLINRHAIDFLLTRWG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5uqy-a2-m1-cN 92 92 1.0000 1.0000 1.0000 5.60e-64 5uqy-a2-m1-cN_5uqy-a2-m1-cF
2 5uqy-a2-m1-cF 94 94 0.9891 0.9681 0.9681 2.41e-59 5uqy-a2-m1-cN_5uqy-a2-m1-cF
3 5uqy-a1-m3-cB 127 106 1.0000 0.7244 0.8679 1.81e-56 5uqy-a1-m2-cB_5uqy-a1-m3-cB
4 5uqy-a1-m2-cB 127 106 1.0000 0.7244 0.8679 1.81e-56 5uqy-a1-m2-cB_5uqy-a1-m3-cB
5 3s88-a5-m9-cJ 106 88 0.5326 0.4623 0.5568 6.22e-32 3s88-a5-m5-cJ_3s88-a5-m9-cJ
6 3s88-a5-m5-cJ 106 88 0.5326 0.4623 0.5568 6.22e-32 3s88-a5-m5-cJ_3s88-a5-m9-cJ
7 4g2k-a1-m1-cB 108 46 0.4891 0.4167 0.9783 2.61e-25 4g2k-a1-m1-cC_4g2k-a1-m1-cB
8 4g2k-a1-m1-cC 107 46 0.4891 0.4206 0.9783 2.83e-25 4g2k-a1-m1-cC_4g2k-a1-m1-cB
9 4r0r-a1-m3-cA 48 21 0.1413 0.2708 0.6190 0.072 4r0r-a1-m2-cA_4r0r-a1-m3-cA
10 4r0r-a1-m2-cA 48 21 0.1413 0.2708 0.6190 0.072 4r0r-a1-m2-cA_4r0r-a1-m3-cA
11 7lnt-a1-m1-cA 238 56 0.1848 0.0714 0.3036 1.2 7lnt-a1-m1-cA_7lnt-a1-m1-cB
12 2iny-a1-m3-cA 941 39 0.1304 0.0128 0.3077 1.8 2iny-a1-m2-cA_2iny-a1-m3-cA
13 2iny-a1-m2-cA 941 39 0.1304 0.0128 0.3077 1.8 2iny-a1-m2-cA_2iny-a1-m3-cA
14 4w66-a1-m1-cB 217 53 0.1739 0.0737 0.3019 4.2 4w66-a1-m1-cB_4w66-a1-m1-cA
15 4w66-a1-m1-cA 232 51 0.1630 0.0647 0.2941 5.9 4w66-a1-m1-cB_4w66-a1-m1-cA
16 5h9c-a1-m3-cA 78 37 0.1957 0.2308 0.4865 6.9 5h9c-a1-m2-cA_5h9c-a1-m3-cA
17 5h9c-a1-m2-cA 78 37 0.1957 0.2308 0.4865 6.9 5h9c-a1-m2-cA_5h9c-a1-m3-cA
18 1v08-a1-m1-cB 490 30 0.1304 0.0245 0.4000 7.2 1v08-a1-m1-cA_1v08-a1-m1-cB
19 1v08-a1-m1-cA 490 30 0.1304 0.0245 0.4000 7.2 1v08-a1-m1-cA_1v08-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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