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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
SPVAVIARFMPRPDARSALRALLDAMITPTRAEDGCRSYDLYESADGGELVLFERYRSRI
ALDEHRGSPHYLNYRAQVGELLTRPVAVTVLAPLDEAS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1y0h-a1-m1-cA 101 98 1.0000 0.9703 1.0000 6.22e-67 1y0h-a1-m1-cB_1y0h-a1-m1-cA
2 1y0h-a1-m1-cB 98 98 1.0000 1.0000 1.0000 6.89e-67 1y0h-a1-m1-cB_1y0h-a1-m1-cA
3 1x7v-a7-m3-cA 96 91 0.2959 0.3021 0.3187 2.62e-11 1x7v-a7-m3-cA_1x7v-a7-m1-cC
4 1x7v-a5-m1-cB 96 91 0.2959 0.3021 0.3187 2.62e-11 1x7v-a5-m1-cB_1x7v-a5-m1-cC
5 1x7v-a4-m2-cB 96 91 0.2959 0.3021 0.3187 2.62e-11 1x7v-a4-m2-cA_1x7v-a4-m2-cB
6 1x7v-a4-m2-cA 96 91 0.2959 0.3021 0.3187 2.62e-11 1x7v-a4-m2-cA_1x7v-a4-m2-cB
7 1x7v-a7-m1-cC 97 91 0.2959 0.2990 0.3187 3.05e-11 1x7v-a7-m3-cA_1x7v-a7-m1-cC
8 1x7v-a5-m1-cC 97 91 0.2959 0.2990 0.3187 3.05e-11 1x7v-a5-m1-cB_1x7v-a5-m1-cC
9 4dpo-a1-m1-cA 99 88 0.2041 0.2020 0.2273 8.96e-07 4dpo-a1-m1-cB_4dpo-a1-m1-cA
10 4dpo-a1-m1-cB 98 88 0.2041 0.2041 0.2273 9.38e-07 4dpo-a1-m1-cB_4dpo-a1-m1-cA
11 4zos-a2-m1-cB 97 89 0.2143 0.2165 0.2360 1.41e-05 4zos-a2-m1-cB_4zos-a2-m1-cA
12 4zos-a2-m1-cA 105 89 0.2143 0.2000 0.2360 1.62e-05 4zos-a2-m1-cB_4zos-a2-m1-cA
13 2bbe-a2-m4-cA 103 79 0.2653 0.2524 0.3291 1.72e-04 2bbe-a2-m1-cA_2bbe-a2-m4-cA
14 2bbe-a2-m1-cA 103 79 0.2653 0.2524 0.3291 1.72e-04 2bbe-a2-m1-cA_2bbe-a2-m4-cA
15 2bbe-a1-m4-cA 103 79 0.2653 0.2524 0.3291 1.72e-04 2bbe-a1-m3-cA_2bbe-a1-m4-cA
16 2bbe-a1-m3-cA 103 79 0.2653 0.2524 0.3291 1.72e-04 2bbe-a1-m3-cA_2bbe-a1-m4-cA
17 2fb0-a1-m2-cA 91 49 0.1429 0.1538 0.2857 0.004 2fb0-a1-m1-cA_2fb0-a1-m2-cA
18 2fb0-a1-m1-cA 91 49 0.1429 0.1538 0.2857 0.004 2fb0-a1-m1-cA_2fb0-a1-m2-cA
19 2omo-a3-m1-cG 95 50 0.1837 0.1895 0.3600 0.026 2omo-a3-m1-cG_2omo-a3-m1-cD
20 2omo-a3-m1-cD 100 50 0.1837 0.1800 0.3600 0.034 2omo-a3-m1-cG_2omo-a3-m1-cD
21 3qmq-a2-m1-cB 97 54 0.1429 0.1443 0.2593 0.89 3qmq-a2-m1-cB_3qmq-a2-m1-cC
22 3qmq-a2-m1-cC 99 54 0.1429 0.1414 0.2593 0.96 3qmq-a2-m1-cB_3qmq-a2-m1-cC
23 4jga-a1-m1-cB 422 24 0.1122 0.0261 0.4583 2.6 4jga-a1-m1-cA_4jga-a1-m1-cB
24 4jga-a1-m1-cA 422 24 0.1122 0.0261 0.4583 2.6 4jga-a1-m1-cA_4jga-a1-m1-cB
25 7en2-a1-m1-cA 1321 75 0.2959 0.0220 0.3867 5.1 7en2-a1-m1-cA_7en2-a1-m1-cB
26 7en2-a1-m1-cB 1410 75 0.2959 0.0206 0.3867 5.5 7en2-a1-m1-cA_7en2-a1-m1-cB
27 7emy-a1-m1-cB 1334 75 0.2959 0.0217 0.3867 5.6 7emy-a1-m1-cA_7emy-a1-m1-cB
28 7emy-a1-m1-cA 1334 75 0.2959 0.0217 0.3867 5.6 7emy-a1-m1-cA_7emy-a1-m1-cB
29 7ueh-a4-m1-cF 386 30 0.1429 0.0363 0.4667 8.8 7ueh-a4-m1-cF_7ueh-a4-m1-cH

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Reference:
Jacob Schwartz et al.

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