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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
SPWYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVY
CIGQRKFSTMEELVEHYKKAPIFTSEQGEKLYLVKHLS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ci8-a1-m2-cA 98 98 1.0000 1.0000 1.0000 4.74e-71 2ci8-a1-m1-cA_2ci8-a1-m2-cA
2 2ci8-a1-m1-cA 98 98 1.0000 1.0000 1.0000 4.74e-71 2ci8-a1-m1-cA_2ci8-a1-m2-cA
3 1opl-a3-m2-cA 451 77 0.3061 0.0665 0.3896 4.20e-12 1opl-a3-m1-cA_1opl-a3-m2-cA
4 1opl-a3-m1-cA 451 77 0.3061 0.0665 0.3896 4.20e-12 1opl-a3-m1-cA_1opl-a3-m2-cA
5 1r1s-a5-m1-cA 96 82 0.3163 0.3229 0.3780 8.50e-12 1r1s-a5-m1-cA_1r1s-a5-m1-cE
6 1r1s-a5-m1-cE 99 82 0.3163 0.3131 0.3780 8.72e-12 1r1s-a5-m1-cA_1r1s-a5-m1-cE
7 1bkl-a1-m2-cA 110 85 0.2959 0.2636 0.3412 1.17e-10 1bkl-a1-m1-cA_1bkl-a1-m2-cA
8 1bkl-a1-m1-cA 110 85 0.2959 0.2636 0.3412 1.17e-10 1bkl-a1-m1-cA_1bkl-a1-m2-cA
9 1f1w-a3-m3-cA 104 85 0.2959 0.2788 0.3412 2.09e-10 1f1w-a3-m1-cA_1f1w-a3-m3-cA
10 1f1w-a3-m1-cA 104 85 0.2959 0.2788 0.3412 2.09e-10 1f1w-a3-m1-cA_1f1w-a3-m3-cA
11 1f1w-a2-m2-cA 104 85 0.2959 0.2788 0.3412 2.09e-10 1f1w-a2-m1-cA_1f1w-a2-m2-cA
12 1f1w-a2-m1-cA 104 85 0.2959 0.2788 0.3412 2.09e-10 1f1w-a2-m1-cA_1f1w-a2-m2-cA
13 1k9a-a7-m1-cC 438 77 0.2755 0.0616 0.3506 2.21e-10 1k9a-a7-m2-cD_1k9a-a7-m1-cC
14 1a1b-a1-m1-cA 105 85 0.2857 0.2667 0.3294 2.74e-10 1a1b-a1-m1-cB_1a1b-a1-m1-cA
15 1a1b-a1-m1-cB 104 85 0.2857 0.2692 0.3294 2.80e-10 1a1b-a1-m1-cB_1a1b-a1-m1-cA
16 4u5w-a1-m1-cB 163 86 0.3163 0.1902 0.3605 1.51e-09 4u5w-a1-m1-cD_4u5w-a1-m1-cB
17 2hck-a1-m1-cB 437 86 0.3163 0.0709 0.3605 3.32e-09 2hck-a1-m1-cA_2hck-a1-m1-cB
18 2hck-a1-m1-cA 437 86 0.3163 0.0709 0.3605 3.32e-09 2hck-a1-m1-cA_2hck-a1-m1-cB
19 1bhh-a1-m1-cB 103 87 0.3265 0.3107 0.3678 4.16e-09 1bhh-a1-m1-cB_1bhh-a1-m1-cA
20 1bhh-a1-m1-cA 104 87 0.3265 0.3077 0.3678 4.58e-09 1bhh-a1-m1-cB_1bhh-a1-m1-cA
21 1nrv-a1-m1-cB 100 79 0.2653 0.2600 0.3291 4.80e-09 1nrv-a1-m1-cA_1nrv-a1-m1-cB
22 1nrv-a1-m1-cA 100 79 0.2653 0.2600 0.3291 4.80e-09 1nrv-a1-m1-cA_1nrv-a1-m1-cB
23 3ps5-a2-m2-cA 529 90 0.3367 0.0624 0.3667 4.95e-09 3ps5-a2-m1-cA_3ps5-a2-m2-cA
24 3ps5-a2-m2-cA 529 78 0.2755 0.0510 0.3462 1.04e-08 3ps5-a2-m1-cA_3ps5-a2-m2-cA
25 3ps5-a2-m1-cA 529 90 0.3367 0.0624 0.3667 4.95e-09 3ps5-a2-m1-cA_3ps5-a2-m2-cA
26 3ps5-a2-m1-cA 529 78 0.2755 0.0510 0.3462 1.04e-08 3ps5-a2-m1-cA_3ps5-a2-m2-cA
27 2aug-a2-m3-cB 108 84 0.2755 0.2500 0.3214 6.10e-09 2aug-a2-m1-cB_2aug-a2-m3-cB
28 2aug-a2-m1-cB 108 84 0.2755 0.2500 0.3214 6.10e-09 2aug-a2-m1-cB_2aug-a2-m3-cB
29 4u17-a2-m2-cB 102 83 0.3265 0.3137 0.3855 9.95e-09 4u17-a2-m1-cB_4u17-a2-m2-cB
30 4u17-a2-m1-cB 102 83 0.3265 0.3137 0.3855 9.95e-09 4u17-a2-m1-cB_4u17-a2-m2-cB
31 1x27-a1-m1-cF 163 87 0.3265 0.1963 0.3678 1.45e-08 1x27-a1-m1-cA_1x27-a1-m1-cF, 1x27-a1-m1-cD_1x27-a1-m1-cF
32 1x27-a1-m1-cD 163 87 0.3265 0.1963 0.3678 1.45e-08 1x27-a1-m1-cD_1x27-a1-m1-cF
33 1x27-a1-m1-cA 163 87 0.3265 0.1963 0.3678 1.45e-08 1x27-a1-m1-cA_1x27-a1-m1-cF
34 1d1z-a2-m1-cB 94 76 0.2347 0.2447 0.3026 3.09e-08 1d1z-a2-m1-cB_1d1z-a2-m1-cD
35 1cwe-a1-m1-cC 98 86 0.3163 0.3163 0.3605 7.42e-08 1cwe-a1-m1-cA_1cwe-a1-m1-cC
36 1cwe-a1-m1-cA 98 86 0.3163 0.3163 0.3605 7.42e-08 1cwe-a1-m1-cA_1cwe-a1-m1-cC
37 1rqq-a1-m1-cD 83 79 0.2347 0.2771 0.2911 5.65e-07 1rqq-a1-m1-cC_1rqq-a1-m1-cD
38 1rqq-a1-m1-cC 83 79 0.2347 0.2771 0.2911 5.65e-07 1rqq-a1-m1-cC_1rqq-a1-m1-cD
39 2qms-a2-m2-cD 113 83 0.2449 0.2124 0.2892 2.65e-06 2qms-a2-m1-cB_2qms-a2-m2-cD
40 2qms-a2-m1-cB 113 83 0.2449 0.2124 0.2892 2.65e-06 2qms-a2-m1-cB_2qms-a2-m2-cD
41 4wwq-a1-m1-cA 112 83 0.2449 0.2143 0.2892 2.66e-06 4wwq-a1-m1-cA_4wwq-a1-m1-cB
42 4wwq-a1-m1-cB 119 83 0.2347 0.1933 0.2771 2.77e-06 4wwq-a1-m1-cA_4wwq-a1-m1-cB
43 1a81-a1-m1-cK 220 79 0.2551 0.1136 0.3165 3.36e-06 1a81-a1-m1-cG_1a81-a1-m1-cK, 1a81-a1-m1-cK_1a81-a1-m1-cI
44 1a81-a1-m1-cK 220 81 0.2143 0.0955 0.2593 0.005 1a81-a1-m1-cG_1a81-a1-m1-cK, 1a81-a1-m1-cK_1a81-a1-m1-cI
45 1a81-a1-m1-cG 220 79 0.2551 0.1136 0.3165 3.36e-06 1a81-a1-m1-cG_1a81-a1-m1-cK
46 1a81-a1-m1-cG 220 81 0.2143 0.0955 0.2593 0.005 1a81-a1-m1-cG_1a81-a1-m1-cK
47 1a81-a1-m1-cI 254 79 0.2551 0.0984 0.3165 3.42e-06 1a81-a1-m1-cK_1a81-a1-m1-cI
48 1a81-a1-m1-cI 254 81 0.2143 0.0827 0.2593 0.006 1a81-a1-m1-cK_1a81-a1-m1-cI
49 4u5w-a1-m1-cD 160 81 0.2653 0.1625 0.3210 4.78e-06 4u5w-a1-m1-cD_4u5w-a1-m1-cB
50 1k9a-a7-m2-cD 433 77 0.2449 0.0554 0.3117 9.80e-06 1k9a-a7-m2-cD_1k9a-a7-m1-cC
51 1rpy-a2-m2-cB 85 55 0.2041 0.2353 0.3636 1.04e-05 1rpy-a2-m1-cB_1rpy-a2-m2-cB
52 1rpy-a2-m1-cB 85 55 0.2041 0.2353 0.3636 1.04e-05 1rpy-a2-m1-cB_1rpy-a2-m2-cB
53 1d1z-a2-m2-cA 101 55 0.1939 0.1881 0.3455 1.29e-05 1d1z-a2-m1-cD_1d1z-a2-m2-cA
54 1d1z-a2-m1-cD 101 55 0.1939 0.1881 0.3455 1.29e-05 1d1z-a2-m1-cB_1d1z-a2-m1-cD, 1d1z-a2-m1-cD_1d1z-a2-m2-cA
55 1d1z-a1-m1-cD 101 55 0.1939 0.1881 0.3455 1.29e-05 1d1z-a1-m1-cC_1d1z-a1-m1-cD
56 1d1z-a1-m1-cC 101 55 0.1939 0.1881 0.3455 1.29e-05 1d1z-a1-m1-cC_1d1z-a1-m1-cD
57 3us4-a2-m2-cA 94 78 0.2245 0.2340 0.2821 2.80e-04 3us4-a2-m1-cA_3us4-a2-m2-cA
58 3us4-a2-m1-cA 94 78 0.2245 0.2340 0.2821 2.80e-04 3us4-a2-m1-cA_3us4-a2-m2-cA
59 7mp3-a1-m1-cB 97 83 0.2449 0.2474 0.2892 3.95e-04 7mp3-a1-m1-cB_7mp3-a1-m1-cA
60 3s9k-a2-m2-cA 114 40 0.1633 0.1404 0.4000 5.91e-04 3s9k-a2-m1-cA_3s9k-a2-m2-cA
61 3s9k-a2-m1-cA 114 40 0.1633 0.1404 0.4000 5.91e-04 3s9k-a2-m1-cA_3s9k-a2-m2-cA
62 7mp3-a1-m1-cA 102 83 0.2449 0.2353 0.2892 0.005 7mp3-a1-m1-cB_7mp3-a1-m1-cA
63 1uur-a1-m2-cA 460 57 0.1837 0.0391 0.3158 0.41 1uur-a1-m1-cA_1uur-a1-m2-cA
64 1uur-a1-m1-cA 460 57 0.1837 0.0391 0.3158 0.41 1uur-a1-m1-cA_1uur-a1-m2-cA
65 3nbu-a3-m1-cF 549 47 0.1020 0.0182 0.2128 8.4 3nbu-a3-m1-cE_3nbu-a3-m1-cF
66 3nbu-a3-m1-cE 549 47 0.1020 0.0182 0.2128 8.4 3nbu-a3-m1-cE_3nbu-a3-m1-cF

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Reference:
Jacob Schwartz et al.

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