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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=67)
SQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQYDDSKVAVSQMKDAIE
DQGYDVV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6ff2-a1-m1-cB 67 67 1.0000 1.0000 1.0000 5.90e-43 6ff2-a1-m1-cA_6ff2-a1-m1-cB
2 6ff2-a1-m1-cA 67 67 1.0000 1.0000 1.0000 5.90e-43 6ff2-a1-m1-cA_6ff2-a1-m1-cB
3 2qif-a1-m1-cB 68 65 0.5522 0.5441 0.5692 6.62e-21 2qif-a1-m1-cB_2qif-a1-m1-cA
4 3i9z-a1-m3-cA 69 65 0.5522 0.5362 0.5692 6.95e-21 3i9z-a1-m2-cA_3i9z-a1-m3-cA
5 3i9z-a1-m2-cA 69 65 0.5522 0.5362 0.5692 6.95e-21 3i9z-a1-m2-cA_3i9z-a1-m3-cA
6 2qif-a1-m1-cA 69 65 0.5522 0.5362 0.5692 6.95e-21 2qif-a1-m1-cB_2qif-a1-m1-cA
7 6a72-a1-m1-cA 71 65 0.2687 0.2535 0.2769 1.19e-09 6a72-a1-m1-cA_6a72-a1-m2-cB
8 6a71-a1-m1-cB 71 65 0.2687 0.2535 0.2769 1.19e-09 6a71-a1-m1-cB_6a71-a1-m1-cA
9 6a72-a1-m2-cB 72 65 0.2687 0.2500 0.2769 1.23e-09 6a72-a1-m1-cA_6a72-a1-m2-cB
10 6a71-a1-m1-cA 72 65 0.2687 0.2500 0.2769 1.23e-09 6a71-a1-m1-cB_6a71-a1-m1-cA
11 3j09-a1-m1-cB 723 66 0.3134 0.0290 0.3182 8.13e-09 3j09-a1-m1-cA_3j09-a1-m1-cB
12 3j09-a1-m1-cA 723 66 0.3134 0.0290 0.3182 8.13e-09 3j09-a1-m1-cA_3j09-a1-m1-cB
13 3iwl-a2-m2-cA 66 39 0.2239 0.2273 0.3846 0.007 3iwl-a2-m1-cA_3iwl-a2-m2-cA
14 3iwl-a2-m1-cA 66 39 0.2239 0.2273 0.3846 0.007 3iwl-a2-m1-cA_3iwl-a2-m2-cA
15 7zc3-a1-m1-cB 67 39 0.2239 0.2239 0.3846 0.007 7zc3-a1-m1-cA_7zc3-a1-m1-cB
16 7zc3-a1-m1-cA 67 39 0.2239 0.2239 0.3846 0.007 7zc3-a1-m1-cA_7zc3-a1-m1-cB
17 3fry-a1-m1-cB 72 61 0.2836 0.2639 0.3115 0.33 3fry-a1-m1-cB_3fry-a1-m1-cA
18 3fry-a1-m1-cA 73 61 0.2836 0.2603 0.3115 0.36 3fry-a1-m1-cB_3fry-a1-m1-cA
19 3vm6-a1-m2-cC 321 31 0.2090 0.0436 0.4516 1.5 3vm6-a1-m2-cB_3vm6-a1-m2-cC
20 3vm6-a1-m2-cB 321 31 0.2090 0.0436 0.4516 1.5 3vm6-a1-m2-cB_3vm6-a1-m2-cC
21 3vm6-a1-m2-cA 321 31 0.2090 0.0436 0.4516 1.5 3vm6-a1-m1-cA_3vm6-a1-m2-cA
22 3vm6-a1-m1-cA 321 31 0.2090 0.0436 0.4516 1.5 3vm6-a1-m1-cA_3vm6-a1-m2-cA
23 5f0u-a1-m2-cA 65 60 0.1791 0.1846 0.2000 2.2 5f0u-a1-m1-cA_5f0u-a1-m2-cA
24 5f0u-a1-m1-cA 65 60 0.1791 0.1846 0.2000 2.2 5f0u-a1-m1-cA_5f0u-a1-m2-cA
25 3a11-a1-m1-cE 317 31 0.2090 0.0442 0.4516 4.4 3a11-a1-m1-cC_3a11-a1-m1-cE
26 3a11-a1-m1-cC 317 31 0.2090 0.0442 0.4516 4.4 3a11-a1-m1-cC_3a11-a1-m1-cE
27 1tmx-a1-m1-cB 287 52 0.2388 0.0557 0.3077 5.0 1tmx-a1-m1-cB_1tmx-a1-m1-cA
28 1tmx-a1-m1-cA 292 52 0.2388 0.0548 0.3077 5.0 1tmx-a1-m1-cB_1tmx-a1-m1-cA
29 5fr7-a2-m1-cA 145 36 0.1343 0.0621 0.2500 8.4 5fr7-a2-m1-cA_5fr7-a2-m1-cB
30 5fr7-a2-m1-cB 146 36 0.1343 0.0616 0.2500 8.9 5fr7-a2-m1-cA_5fr7-a2-m1-cB
31 5fr7-a1-m2-cB 146 36 0.1343 0.0616 0.2500 8.9 5fr7-a1-m1-cB_5fr7-a1-m2-cB
32 5fr7-a1-m1-cB 146 36 0.1343 0.0616 0.2500 8.9 5fr7-a1-m1-cB_5fr7-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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