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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=69)
SQQKIQAAEAELDLVTDMFNKLVNNCYKKCINTSYSEGELNKNESSCLDRCVAKYFETNV
QVGENMQKM

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3dxr-a2-m6-cB 69 69 1.0000 1.0000 1.0000 4.32e-46 3dxr-a2-m2-cB_3dxr-a2-m6-cB
2 3dxr-a2-m2-cB 69 69 1.0000 1.0000 1.0000 4.32e-46 3dxr-a2-m2-cB_3dxr-a2-m6-cB
3 7npw-a1-m1-cC 426 36 0.2029 0.0329 0.3889 0.94 7npw-a1-m1-cB_7npw-a1-m1-cC
4 7npw-a1-m1-cB 426 36 0.2029 0.0329 0.3889 0.94 7npw-a1-m1-cB_7npw-a1-m1-cC
5 1xdx-a1-m1-cB 114 28 0.1449 0.0877 0.3571 3.9 1xdx-a1-m1-cA_1xdx-a1-m1-cB
6 1xdx-a1-m1-cA 114 28 0.1449 0.0877 0.3571 3.9 1xdx-a1-m1-cA_1xdx-a1-m1-cB
7 6dk3-a2-m2-cA 423 39 0.2029 0.0331 0.3590 4.1 6dk3-a2-m1-cA_6dk3-a2-m2-cA
8 6dk3-a2-m1-cA 423 39 0.2029 0.0331 0.3590 4.1 6dk3-a2-m1-cA_6dk3-a2-m2-cA
9 4wd3-a1-m1-cB 378 33 0.1594 0.0291 0.3333 5.7 4wd3-a1-m1-cA_4wd3-a1-m1-cB
10 4wd3-a1-m1-cA 378 33 0.1594 0.0291 0.3333 5.7 4wd3-a1-m1-cA_4wd3-a1-m1-cB
11 1ygs-a1-m3-cA 190 17 0.1304 0.0474 0.5294 9.8 1ygs-a1-m2-cA_1ygs-a1-m3-cA
12 1ygs-a1-m2-cA 190 17 0.1304 0.0474 0.5294 9.8 1ygs-a1-m2-cA_1ygs-a1-m3-cA

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Reference:
Jacob Schwartz et al.

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