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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=64)
SQYWKEVAEQRRKALYEALKENEKLHKEIEQKDSEIARLRKENKDLAEVAEHVQYAEVIE
RLSN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2zxx-a2-m1-cD 64 64 1.0000 1.0000 1.0000 5.75e-39 2zxx-a2-m1-cD_2zxx-a2-m1-cE
2 2zxx-a2-m1-cE 77 63 0.9844 0.8182 1.0000 2.73e-38 2zxx-a2-m1-cD_2zxx-a2-m1-cE
3 2wvr-a1-m2-cA 70 65 0.8906 0.8143 0.8769 1.25e-32 2wvr-a1-m2-cA_2wvr-a1-m2-cB
4 2wvr-a1-m2-cB 74 64 0.8906 0.7703 0.8906 1.32e-32 2wvr-a1-m2-cA_2wvr-a1-m2-cB
5 2j5u-a1-m9-cA 210 31 0.2500 0.0762 0.5161 0.22 2j5u-a1-m9-cB_2j5u-a1-m9-cA
6 2j5u-a1-m9-cB 201 22 0.2031 0.0647 0.5909 0.26 2j5u-a1-m10-cB_2j5u-a1-m9-cB, 2j5u-a1-m6-cB_2j5u-a1-m9-cB, 2j5u-a1-m9-cB_2j5u-a1-m9-cA
7 2j5u-a1-m6-cB 201 22 0.2031 0.0647 0.5909 0.26 2j5u-a1-m6-cB_2j5u-a1-m9-cB
8 2j5u-a1-m10-cB 201 22 0.2031 0.0647 0.5909 0.26 2j5u-a1-m10-cB_2j5u-a1-m9-cB
9 6gir-a1-m2-cA 406 54 0.3125 0.0493 0.3704 0.64 6gir-a1-m1-cA_6gir-a1-m2-cA
10 6gir-a1-m1-cA 406 54 0.3125 0.0493 0.3704 0.64 6gir-a1-m1-cA_6gir-a1-m2-cA
11 3ppm-a1-m1-cB 545 36 0.1875 0.0220 0.3333 2.0 3ppm-a1-m1-cB_3ppm-a1-m1-cA
12 3ppm-a1-m1-cA 546 36 0.1875 0.0220 0.3333 2.0 3ppm-a1-m1-cB_3ppm-a1-m1-cA
13 3thf-a2-m2-cB 174 35 0.2031 0.0747 0.3714 2.8 3thf-a2-m2-cB_3thf-a2-m1-cA, 3thf-a2-m2-cB_3thf-a2-m2-cA
14 3thf-a2-m2-cA 175 35 0.2031 0.0743 0.3714 2.9 3thf-a2-m2-cB_3thf-a2-m2-cA
15 3thf-a2-m1-cA 175 35 0.2031 0.0743 0.3714 2.9 3thf-a2-m2-cB_3thf-a2-m1-cA
16 3gaa-a1-m2-cE 243 30 0.1719 0.0453 0.3667 6.7 3gaa-a1-m1-cD_3gaa-a1-m2-cE, 3gaa-a1-m2-cD_3gaa-a1-m2-cE
17 3gaa-a1-m1-cA 243 30 0.1719 0.0453 0.3667 6.7 3gaa-a1-m2-cD_3gaa-a1-m1-cA
18 3gaa-a1-m2-cD 242 30 0.1719 0.0455 0.3667 7.3 3gaa-a1-m2-cD_3gaa-a1-m1-cA, 3gaa-a1-m2-cD_3gaa-a1-m2-cE
19 3gaa-a1-m1-cD 242 30 0.1719 0.0455 0.3667 7.3 3gaa-a1-m1-cD_3gaa-a1-m2-cE

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Reference:
Jacob Schwartz et al.

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