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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=17)
SRAQILCKATEYIQYMR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7rcu-a1-m1-cS 19 17 1.0000 0.8947 1.0000 2.49e-06 7rcu-a1-m1-cQ_7rcu-a1-m1-cS
2 7rcu-a1-m1-cQ 17 17 1.0000 1.0000 1.0000 2.60e-06 7rcu-a1-m1-cQ_7rcu-a1-m1-cS
3 5eyo-a2-m2-cC 88 17 0.9412 0.1818 0.9412 3.50e-05 5eyo-a2-m1-cC_5eyo-a2-m2-cC
4 5eyo-a2-m1-cC 88 17 0.9412 0.1818 0.9412 3.50e-05 5eyo-a2-m1-cC_5eyo-a2-m2-cC
5 1r05-a1-m1-cB 87 17 0.9412 0.1839 0.9412 6.57e-05 1r05-a1-m1-cA_1r05-a1-m1-cB
6 1r05-a1-m1-cA 87 17 0.9412 0.1839 0.9412 6.57e-05 1r05-a1-m1-cA_1r05-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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