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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=41)
SRDELMEAIQKQEEINFRLQDYIDRIIVAIMETNPSILEVK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2hv8-a2-m1-cE 55 41 1.0000 0.7455 1.0000 6.86e-24 2hv8-a2-m1-cF_2hv8-a2-m1-cE
2 2hv8-a2-m1-cF 41 41 1.0000 1.0000 1.0000 1.76e-23 2hv8-a2-m1-cF_2hv8-a2-m1-cE
3 4uj4-a3-m3-cL 38 38 0.9268 1.0000 1.0000 5.05e-21 4uj4-a3-m1-cC_4uj4-a3-m3-cL
4 4uj4-a3-m1-cC 36 36 0.8780 1.0000 1.0000 1.17e-19 4uj4-a3-m1-cC_4uj4-a3-m3-cL
5 2gzd-a1-m1-cD 34 22 0.3171 0.3824 0.5909 0.51 2gzd-a1-m1-cC_2gzd-a1-m1-cD
6 2gzd-a1-m1-cC 34 22 0.3171 0.3824 0.5909 0.51 2gzd-a1-m1-cC_2gzd-a1-m1-cD
7 5wy1-a1-m2-cA 1140 33 0.2927 0.0105 0.3636 4.0 5wy1-a1-m1-cA_5wy1-a1-m2-cA
8 5wy1-a1-m1-cA 1140 33 0.2927 0.0105 0.3636 4.0 5wy1-a1-m1-cA_5wy1-a1-m2-cA
9 1vjq-a1-m1-cB 71 17 0.1951 0.1127 0.4706 5.9 1vjq-a1-m1-cA_1vjq-a1-m1-cB
10 1vjq-a1-m1-cA 71 17 0.1951 0.1127 0.4706 5.9 1vjq-a1-m1-cA_1vjq-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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