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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
SREEFEQILQERNELKAKVFLLKEELAYFQRELLTDHRVPSLLLEAMKVAVRKQRKKIKA
KMLGT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1yhn-a1-m2-cB 65 65 1.0000 1.0000 1.0000 1.70e-40 1yhn-a1-m1-cB_1yhn-a1-m2-cB
2 1yhn-a1-m1-cB 65 65 1.0000 1.0000 1.0000 1.70e-40 1yhn-a1-m1-cB_1yhn-a1-m2-cB
3 6sq2-a1-m1-cD 31 24 0.1692 0.3548 0.4583 0.41 6sq2-a1-m1-cD_6sq2-a1-m1-cE
4 6sq2-a1-m1-cE 32 24 0.1692 0.3438 0.4583 0.41 6sq2-a1-m1-cD_6sq2-a1-m1-cE
5 7som-a1-m1-cS 432 63 0.2308 0.0347 0.2381 1.2 7som-a1-m1-cS_7som-a1-m1-cR
6 7n61-a1-m1-c0A 467 62 0.2462 0.0343 0.2581 3.5 7n61-a1-m1-c0A_7n61-a1-m1-c0D
7 7som-a1-m1-cR 433 62 0.2462 0.0370 0.2581 3.5 7som-a1-m1-cS_7som-a1-m1-cR
8 7n61-a1-m1-c0D 476 62 0.2462 0.0336 0.2581 3.8 7n61-a1-m1-c0A_7n61-a1-m1-c0D
9 5tf0-a1-m1-cB 706 27 0.2154 0.0198 0.5185 4.0 5tf0-a1-m1-cA_5tf0-a1-m1-cB
10 5tf0-a1-m1-cA 706 27 0.2154 0.0198 0.5185 4.0 5tf0-a1-m1-cA_5tf0-a1-m1-cB
11 3djc-a1-m1-cJ 250 24 0.1385 0.0360 0.3750 4.5 3djc-a1-m1-cJ_3djc-a1-m1-cI
12 3djc-a1-m1-cI 255 24 0.1385 0.0353 0.3750 4.6 3djc-a1-m1-cJ_3djc-a1-m1-cI
13 3djc-a2-m1-cC 256 24 0.1385 0.0352 0.3750 4.6 3djc-a2-m1-cB_3djc-a2-m1-cC
14 3djc-a2-m1-cB 256 24 0.1385 0.0352 0.3750 4.6 3djc-a2-m1-cB_3djc-a2-m1-cC
15 3vgf-a2-m2-cA 555 24 0.1538 0.0180 0.4167 8.3 3vgf-a2-m1-cA_3vgf-a2-m2-cA
16 3vgf-a2-m1-cA 555 24 0.1538 0.0180 0.4167 8.3 3vgf-a2-m1-cA_3vgf-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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