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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
SRLDREYEEEIHSLKERLHMSNRKLEEYERRLLSQEEQTSKILMQYQARLEQSEKRLRQQ
QVEKDSQIKSIIGRLMLVEEELRRDH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5jxc-a1-m1-cA 86 86 1.0000 1.0000 1.0000 2.02e-53 5jxc-a1-m1-cC_5jxc-a1-m1-cA
2 5jxc-a2-m1-cE 84 84 0.9767 1.0000 1.0000 2.49e-51 5jxc-a2-m1-cF_5jxc-a2-m1-cE
3 5jxc-a2-m1-cF 80 80 0.9302 1.0000 1.0000 2.28e-48 5jxc-a2-m1-cF_5jxc-a2-m1-cE
4 5jxc-a1-m1-cC 78 78 0.9070 1.0000 1.0000 4.86e-47 5jxc-a1-m1-cC_5jxc-a1-m1-cA
5 3o0z-a2-m1-cC 156 62 0.2674 0.1474 0.3710 3.9 3o0z-a2-m1-cC_3o0z-a2-m1-cD
6 3o0z-a2-m1-cD 157 62 0.2674 0.1465 0.3710 4.0 3o0z-a2-m1-cC_3o0z-a2-m1-cD
7 2okk-a1-m2-cA 482 38 0.1512 0.0270 0.3421 4.0 2okk-a1-m1-cA_2okk-a1-m2-cA
8 2okk-a1-m1-cA 482 38 0.1512 0.0270 0.3421 4.0 2okk-a1-m1-cA_2okk-a1-m2-cA
9 4cpc-a2-m1-cC 144 85 0.2907 0.1736 0.2941 5.4 4cpc-a2-m1-cD_4cpc-a2-m1-cC
10 4cpc-a2-m1-cA 143 85 0.2907 0.1748 0.2941 5.5 4cpc-a2-m1-cD_4cpc-a2-m1-cA
11 4cpc-a2-m1-cB 144 85 0.2907 0.1736 0.2941 5.7 4cpc-a2-m1-cD_4cpc-a2-m1-cB
12 4cpc-a2-m1-cD 141 85 0.2907 0.1773 0.2941 5.7 4cpc-a2-m1-cD_4cpc-a2-m1-cA, 4cpc-a2-m1-cD_4cpc-a2-m1-cB, 4cpc-a2-m1-cD_4cpc-a2-m1-cC
13 7fe4-a1-m2-cC 659 47 0.1279 0.0167 0.2340 7.7 7fe4-a1-m1-cA_7fe4-a1-m2-cC, 7fe4-a1-m1-cC_7fe4-a1-m2-cC, 7fe4-a1-m2-cB_7fe4-a1-m2-cC
14 7fe4-a1-m2-cB 659 47 0.1279 0.0167 0.2340 7.7 7fe4-a1-m2-cB_7fe4-a1-m2-cC
15 7fe4-a1-m1-cC 659 47 0.1279 0.0167 0.2340 7.7 7fe4-a1-m1-cC_7fe4-a1-m2-cC
16 7fe4-a1-m1-cA 659 47 0.1279 0.0167 0.2340 7.7 7fe4-a1-m1-cA_7fe4-a1-m2-cC
17 3u59-a2-m2-cC 101 77 0.2442 0.2079 0.2727 8.0 3u59-a2-m1-cC_3u59-a2-m2-cC
18 3u59-a2-m1-cC 101 77 0.2442 0.2079 0.2727 8.0 3u59-a2-m1-cC_3u59-a2-m2-cC
19 3iyo-a1-m9-cD 461 29 0.1279 0.0239 0.3793 9.8 3iyo-a1-m23-cD_3iyo-a1-m9-cD, 3iyo-a1-m9-cD_3iyo-a1-m24-cB, 3iyo-a1-m9-cD_3iyo-a1-m9-cA
20 3iyo-a1-m23-cD 461 29 0.1279 0.0239 0.3793 9.8 3iyo-a1-m23-cD_3iyo-a1-m9-cD
21 3iyo-a1-m9-cA 468 29 0.1279 0.0235 0.3793 9.8 3iyo-a1-m9-cD_3iyo-a1-m9-cA
22 3iyo-a1-m24-cB 468 29 0.1279 0.0235 0.3793 9.8 3iyo-a1-m9-cD_3iyo-a1-m24-cB
23 3hag-a1-m9-cA 468 29 0.1279 0.0235 0.3793 9.8 3hag-a1-m54-cA_3hag-a1-m9-cA, 3hag-a1-m55-cA_3hag-a1-m9-cA, 3hag-a1-m8-cA_3hag-a1-m9-cA
24 3hag-a1-m8-cA 468 29 0.1279 0.0235 0.3793 9.8 3hag-a1-m8-cA_3hag-a1-m9-cA
25 3hag-a1-m55-cA 468 29 0.1279 0.0235 0.3793 9.8 3hag-a1-m55-cA_3hag-a1-m9-cA
26 3hag-a1-m54-cA 468 29 0.1279 0.0235 0.3793 9.8 3hag-a1-m54-cA_3hag-a1-m9-cA

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Reference:
Jacob Schwartz et al.

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