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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
SRLNRQLEEKINDCAEVKQELAASRTARDAALERVQMLEQQILAYKDDFMSERADRERAQ
SRIQELEEKVASLLHQVS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5h07-a1-m1-cD 78 78 1.0000 1.0000 1.0000 7.95e-50 5h07-a1-m1-cC_5h07-a1-m1-cD
2 5h07-a1-m1-cC 66 66 0.8462 1.0000 1.0000 6.60e-41 5h07-a1-m1-cC_5h07-a1-m1-cD
3 7eb9-a1-m1-cB 54 43 0.2179 0.3148 0.3953 5.00e-04 7eb9-a1-m1-cB_7eb9-a1-m1-cC
4 7eb9-a1-m1-cC 60 43 0.2179 0.2833 0.3953 6.15e-04 7eb9-a1-m1-cB_7eb9-a1-m1-cC
5 4wlm-a3-m1-cB 290 57 0.2179 0.0586 0.2982 1.1 4wlm-a3-m2-cA_4wlm-a3-m1-cB
6 4wlm-a3-m2-cA 286 57 0.2179 0.0594 0.2982 1.3 4wlm-a3-m2-cA_4wlm-a3-m1-cB
7 2fxo-a2-m1-cD 127 38 0.1667 0.1024 0.3421 5.2 2fxo-a2-m1-cC_2fxo-a2-m1-cD
8 2fxo-a2-m1-cC 127 38 0.1667 0.1024 0.3421 5.3 2fxo-a2-m1-cC_2fxo-a2-m1-cD
9 6owk-a1-m3-cA 582 46 0.1667 0.0223 0.2826 6.2 6owk-a1-m2-cA_6owk-a1-m3-cA
10 6owk-a1-m2-cA 582 46 0.1667 0.0223 0.2826 6.2 6owk-a1-m2-cA_6owk-a1-m3-cA
11 5b83-a2-m1-cE 50 27 0.1538 0.2400 0.4444 6.2 5b83-a2-m1-cE_5b83-a2-m1-cF
12 5b83-a2-m1-cF 59 27 0.1538 0.2034 0.4444 6.4 5b83-a2-m1-cE_5b83-a2-m1-cF
13 3mti-a1-m1-cA 159 36 0.1923 0.0943 0.4167 6.8 3mti-a1-m1-cA_3mti-a1-m1-cB
14 2v4h-a1-m2-cA 98 43 0.1923 0.1531 0.3488 9.2 2v4h-a1-m1-cA_2v4h-a1-m2-cA, 2v4h-a1-m2-cB_2v4h-a1-m2-cA
15 2v4h-a1-m1-cA 98 43 0.1923 0.1531 0.3488 9.2 2v4h-a1-m1-cA_2v4h-a1-m2-cA, 2v4h-a1-m2-cB_2v4h-a1-m1-cA
16 6szi-a1-m1-cB 1185 32 0.1410 0.0093 0.3438 9.9 6szi-a1-m1-cB_6szi-a1-m1-cA
17 6szi-a1-m1-cA 1276 32 0.1410 0.0086 0.3438 9.9 6szi-a1-m1-cB_6szi-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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