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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=59)
SRRMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ql2-a3-m1-cB 59 59 1.0000 1.0000 1.0000 5.88e-38 2ql2-a3-m1-cD_2ql2-a3-m1-cB
2 2ql2-a3-m1-cD 57 57 0.9661 1.0000 1.0000 1.25e-36 2ql2-a3-m1-cD_2ql2-a3-m1-cB
3 7z5k-a1-m1-cB 56 56 0.3559 0.3750 0.3750 1.12e-04 7z5k-a1-m1-cA_7z5k-a1-m1-cB
4 1mdy-a2-m1-cD 62 59 0.3729 0.3548 0.3729 1.26e-04 1mdy-a2-m1-cC_1mdy-a2-m1-cD
5 1mdy-a2-m1-cC 62 59 0.3729 0.3548 0.3729 1.26e-04 1mdy-a2-m1-cC_1mdy-a2-m1-cD
6 7z5k-a1-m1-cA 56 55 0.3559 0.3750 0.3818 1.95e-04 7z5k-a1-m1-cA_7z5k-a1-m1-cB
7 6od5-a1-m1-cB 60 59 0.3559 0.3500 0.3559 0.027 6od5-a1-m1-cB_6od5-a1-m1-cA
8 6od5-a1-m1-cA 62 59 0.3559 0.3387 0.3559 0.029 6od5-a1-m1-cB_6od5-a1-m1-cA
9 6u2u-a1-m1-cA 46 40 0.2034 0.2609 0.3000 0.11 6u2u-a1-m1-cB_6u2u-a1-m1-cA
10 6u2u-a1-m1-cB 44 37 0.1864 0.2500 0.2973 0.11 6u2u-a1-m1-cB_6u2u-a1-m1-cA
11 4aya-a1-m1-cB 48 46 0.2373 0.2917 0.3043 0.12 4aya-a1-m1-cB_4aya-a1-m1-cA
12 4aya-a1-m1-cA 59 46 0.2373 0.2373 0.3043 0.14 4aya-a1-m1-cB_4aya-a1-m1-cA
13 2lfh-a1-m1-cB 68 43 0.2034 0.1765 0.2791 0.74 2lfh-a1-m1-cA_2lfh-a1-m1-cB
14 2lfh-a1-m1-cA 68 43 0.2034 0.1765 0.2791 0.74 2lfh-a1-m1-cA_2lfh-a1-m1-cB
15 1ku9-a1-m1-cB 146 44 0.2034 0.0822 0.2727 2.6 1ku9-a1-m1-cA_1ku9-a1-m1-cB
16 1ku9-a1-m1-cA 146 44 0.2034 0.0822 0.2727 2.6 1ku9-a1-m1-cA_1ku9-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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