Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=70)
SRTACKRCRLKKIKCDQEFPSCKRCAKLEVPCVSLDPATGKDVPRSYVFFLEDRLAVMMR
VLKEYGVDPT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1pyi-a1-m1-cB 70 70 1.0000 1.0000 1.0000 1.88e-46 1pyi-a1-m1-cB_1pyi-a1-m1-cA
2 1pyi-a1-m1-cA 88 70 1.0000 0.7955 1.0000 2.18e-46 1pyi-a1-m1-cB_1pyi-a1-m1-cA
3 3coq-a1-m1-cB 89 53 0.3000 0.2360 0.3962 0.001 3coq-a1-m1-cA_3coq-a1-m1-cB
4 3coq-a1-m1-cA 89 53 0.3000 0.2360 0.3962 0.001 3coq-a1-m1-cA_3coq-a1-m1-cB
5 2ere-a1-m1-cB 60 59 0.3000 0.3500 0.3559 0.059 2ere-a1-m1-cA_2ere-a1-m1-cB
6 2ere-a1-m1-cA 60 59 0.3000 0.3500 0.3559 0.059 2ere-a1-m1-cA_2ere-a1-m1-cB
7 1hwt-a2-m1-cG 70 27 0.1714 0.1714 0.4444 0.38 1hwt-a2-m1-cG_1hwt-a2-m1-cH
8 1hwt-a2-m1-cH 73 27 0.1714 0.1644 0.4444 0.44 1hwt-a2-m1-cG_1hwt-a2-m1-cH
9 8ewy-a1-m1-cB 1049 36 0.1714 0.0114 0.3333 0.76 8ewy-a1-m1-cA_8ewy-a1-m1-cB
10 8ewy-a1-m1-cA 1049 36 0.1714 0.0114 0.3333 0.76 8ewy-a1-m1-cA_8ewy-a1-m1-cB
11 7t6f-a1-m1-cB 1045 36 0.1714 0.0115 0.3333 0.81 7t6f-a1-m1-cA_7t6f-a1-m1-cB
12 7t6f-a1-m1-cA 1045 36 0.1714 0.0115 0.3333 0.81 7t6f-a1-m1-cA_7t6f-a1-m1-cB
13 1ajy-a1-m1-cB 71 52 0.2429 0.2394 0.3269 1.8 1ajy-a1-m1-cA_1ajy-a1-m1-cB
14 1ajy-a1-m1-cA 71 52 0.2429 0.2394 0.3269 1.8 1ajy-a1-m1-cA_1ajy-a1-m1-cB
15 1zme-a1-m1-cD 70 52 0.2429 0.2429 0.3269 1.9 1zme-a1-m1-cC_1zme-a1-m1-cD
16 1zme-a1-m1-cC 70 52 0.2429 0.2429 0.3269 1.9 1zme-a1-m1-cC_1zme-a1-m1-cD
17 7ep9-a1-m1-cG 660 23 0.1286 0.0136 0.3913 2.3 7ep9-a1-m1-cA_7ep9-a1-m1-cG, 7ep9-a1-m1-cB_7ep9-a1-m1-cG
18 7ep9-a1-m1-cB 660 23 0.1286 0.0136 0.3913 2.3 7ep9-a1-m1-cB_7ep9-a1-m1-cG
19 7ep9-a1-m1-cA 660 23 0.1286 0.0136 0.3913 2.3 7ep9-a1-m1-cA_7ep9-a1-m1-cG
20 2h6r-a2-m1-cG 200 36 0.1571 0.0550 0.3056 2.7 2h6r-a2-m1-cG_2h6r-a2-m1-cH
21 2h6r-a2-m1-cF 201 33 0.1429 0.0498 0.3030 5.7 2h6r-a2-m1-cF_2h6r-a2-m1-cH
22 4l00-a3-m1-cB 278 36 0.1714 0.0432 0.3333 6.1 4l00-a3-m1-cA_4l00-a3-m1-cB
23 2c5s-a1-m2-cA 372 43 0.2000 0.0376 0.3256 6.1 2c5s-a1-m1-cA_2c5s-a1-m2-cA
24 2c5s-a1-m1-cA 372 43 0.2000 0.0376 0.3256 6.1 2c5s-a1-m1-cA_2c5s-a1-m2-cA
25 4l00-a3-m1-cA 277 36 0.1714 0.0433 0.3333 6.3 4l00-a3-m1-cA_4l00-a3-m1-cB
26 2pjr-a1-m1-cA 542 17 0.1286 0.0166 0.5294 8.7 2pjr-a1-m1-cA_2pjr-a1-m1-cF
27 2pjr-a1-m1-cF 544 17 0.1286 0.0165 0.5294 8.7 2pjr-a1-m1-cA_2pjr-a1-m1-cF

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600