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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
SRTACKRCRLKKIKCDQEFPSCKRCAKLEVPCVSLDPATGKDVPRSYVFFLEDRLAVMMR
VLKEYGVDPT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1pyi-a1-m1-cB 70 70 1.0000 1.0000 1.0000 1.88e-46 1pyi-a1-m1-cB_1pyi-a1-m1-cA
2 1pyi-a1-m1-cA 88 70 1.0000 0.7955 1.0000 2.18e-46 1pyi-a1-m1-cB_1pyi-a1-m1-cA
3 3coq-a1-m1-cB 89 53 0.3000 0.2360 0.3962 0.001 3coq-a1-m1-cA_3coq-a1-m1-cB
4 3coq-a1-m1-cA 89 53 0.3000 0.2360 0.3962 0.001 3coq-a1-m1-cA_3coq-a1-m1-cB
5 2ere-a1-m1-cB 60 59 0.3000 0.3500 0.3559 0.059 2ere-a1-m1-cA_2ere-a1-m1-cB
6 2ere-a1-m1-cA 60 59 0.3000 0.3500 0.3559 0.059 2ere-a1-m1-cA_2ere-a1-m1-cB
7 1hwt-a2-m1-cG 70 27 0.1714 0.1714 0.4444 0.38 1hwt-a2-m1-cG_1hwt-a2-m1-cH
8 1hwt-a2-m1-cH 73 27 0.1714 0.1644 0.4444 0.44 1hwt-a2-m1-cG_1hwt-a2-m1-cH
9 8ewy-a1-m1-cB 1049 36 0.1714 0.0114 0.3333 0.76 8ewy-a1-m1-cA_8ewy-a1-m1-cB
10 8ewy-a1-m1-cA 1049 36 0.1714 0.0114 0.3333 0.76 8ewy-a1-m1-cA_8ewy-a1-m1-cB
11 7t6f-a1-m1-cB 1045 36 0.1714 0.0115 0.3333 0.81 7t6f-a1-m1-cA_7t6f-a1-m1-cB
12 7t6f-a1-m1-cA 1045 36 0.1714 0.0115 0.3333 0.81 7t6f-a1-m1-cA_7t6f-a1-m1-cB
13 1ajy-a1-m1-cB 71 52 0.2429 0.2394 0.3269 1.8 1ajy-a1-m1-cA_1ajy-a1-m1-cB
14 1ajy-a1-m1-cA 71 52 0.2429 0.2394 0.3269 1.8 1ajy-a1-m1-cA_1ajy-a1-m1-cB
15 1zme-a1-m1-cD 70 52 0.2429 0.2429 0.3269 1.9 1zme-a1-m1-cC_1zme-a1-m1-cD
16 1zme-a1-m1-cC 70 52 0.2429 0.2429 0.3269 1.9 1zme-a1-m1-cC_1zme-a1-m1-cD
17 7ep9-a1-m1-cG 660 23 0.1286 0.0136 0.3913 2.3 7ep9-a1-m1-cA_7ep9-a1-m1-cG, 7ep9-a1-m1-cB_7ep9-a1-m1-cG
18 7ep9-a1-m1-cB 660 23 0.1286 0.0136 0.3913 2.3 7ep9-a1-m1-cB_7ep9-a1-m1-cG
19 7ep9-a1-m1-cA 660 23 0.1286 0.0136 0.3913 2.3 7ep9-a1-m1-cA_7ep9-a1-m1-cG
20 2h6r-a2-m1-cG 200 36 0.1571 0.0550 0.3056 2.7 2h6r-a2-m1-cG_2h6r-a2-m1-cH
21 2h6r-a2-m1-cF 201 33 0.1429 0.0498 0.3030 5.7 2h6r-a2-m1-cF_2h6r-a2-m1-cH
22 4l00-a3-m1-cB 278 36 0.1714 0.0432 0.3333 6.1 4l00-a3-m1-cA_4l00-a3-m1-cB
23 2c5s-a1-m2-cA 372 43 0.2000 0.0376 0.3256 6.1 2c5s-a1-m1-cA_2c5s-a1-m2-cA
24 2c5s-a1-m1-cA 372 43 0.2000 0.0376 0.3256 6.1 2c5s-a1-m1-cA_2c5s-a1-m2-cA
25 4l00-a3-m1-cA 277 36 0.1714 0.0433 0.3333 6.3 4l00-a3-m1-cA_4l00-a3-m1-cB
26 2pjr-a1-m1-cA 542 17 0.1286 0.0166 0.5294 8.7 2pjr-a1-m1-cA_2pjr-a1-m1-cF
27 2pjr-a1-m1-cF 544 17 0.1286 0.0165 0.5294 8.7 2pjr-a1-m1-cA_2pjr-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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