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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
SRTACKRCRLKKIKCDQEFPSCKRCAKLEVPCVSLDPATGKDVPRSYVFFLEDRLAVMMR
VLKEYGVDPTKIRGNIPATSDDEPFDLK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1pyi-a1-m1-cA 88 88 1.0000 1.0000 1.0000 2.20e-60 1pyi-a1-m1-cB_1pyi-a1-m1-cA
2 1pyi-a1-m1-cB 70 70 0.7955 1.0000 1.0000 2.75e-46 1pyi-a1-m1-cB_1pyi-a1-m1-cA
3 3coq-a1-m1-cB 89 53 0.2386 0.2360 0.3962 0.001 3coq-a1-m1-cA_3coq-a1-m1-cB
4 3coq-a1-m1-cA 89 53 0.2386 0.2360 0.3962 0.001 3coq-a1-m1-cA_3coq-a1-m1-cB
5 2ere-a1-m1-cB 60 59 0.2386 0.3500 0.3559 0.11 2ere-a1-m1-cA_2ere-a1-m1-cB
6 2ere-a1-m1-cA 60 59 0.2386 0.3500 0.3559 0.11 2ere-a1-m1-cA_2ere-a1-m1-cB
7 1hwt-a2-m1-cG 70 27 0.1364 0.1714 0.4444 0.51 1hwt-a2-m1-cG_1hwt-a2-m1-cH
8 1hwt-a2-m1-cH 73 27 0.1364 0.1644 0.4444 0.56 1hwt-a2-m1-cG_1hwt-a2-m1-cH
9 8ewy-a1-m1-cB 1049 36 0.1364 0.0114 0.3333 1.4 8ewy-a1-m1-cA_8ewy-a1-m1-cB
10 8ewy-a1-m1-cA 1049 36 0.1364 0.0114 0.3333 1.4 8ewy-a1-m1-cA_8ewy-a1-m1-cB
11 7t6f-a1-m1-cB 1045 36 0.1364 0.0115 0.3333 1.5 7t6f-a1-m1-cA_7t6f-a1-m1-cB
12 7t6f-a1-m1-cA 1045 36 0.1364 0.0115 0.3333 1.5 7t6f-a1-m1-cA_7t6f-a1-m1-cB
13 2pjr-a1-m1-cA 542 35 0.1591 0.0258 0.4000 1.9 2pjr-a1-m1-cA_2pjr-a1-m1-cF
14 2pjr-a1-m1-cF 544 35 0.1591 0.0257 0.4000 1.9 2pjr-a1-m1-cA_2pjr-a1-m1-cF
15 1ajy-a1-m1-cB 71 53 0.1932 0.2394 0.3208 2.3 1ajy-a1-m1-cA_1ajy-a1-m1-cB
16 1ajy-a1-m1-cA 71 53 0.1932 0.2394 0.3208 2.3 1ajy-a1-m1-cA_1ajy-a1-m1-cB
17 1zme-a1-m1-cD 70 52 0.1932 0.2429 0.3269 2.4 1zme-a1-m1-cC_1zme-a1-m1-cD
18 1zme-a1-m1-cC 70 52 0.1932 0.2429 0.3269 2.4 1zme-a1-m1-cC_1zme-a1-m1-cD
19 7ep9-a1-m1-cG 660 23 0.1023 0.0136 0.3913 4.1 7ep9-a1-m1-cA_7ep9-a1-m1-cG, 7ep9-a1-m1-cB_7ep9-a1-m1-cG
20 7ep9-a1-m1-cB 660 23 0.1023 0.0136 0.3913 4.1 7ep9-a1-m1-cB_7ep9-a1-m1-cG
21 7ep9-a1-m1-cA 660 23 0.1023 0.0136 0.3913 4.1 7ep9-a1-m1-cA_7ep9-a1-m1-cG
22 6su1-a1-m1-cA 439 60 0.2159 0.0433 0.3167 4.6 6su1-a1-m1-cA_6su1-a1-m1-cD
23 2h6r-a2-m1-cG 200 36 0.1250 0.0550 0.3056 5.7 2h6r-a2-m1-cG_2h6r-a2-m1-cH
24 2e0n-a1-m1-cB 238 21 0.1023 0.0378 0.4286 5.7 2e0n-a1-m1-cA_2e0n-a1-m1-cB
25 2qsw-a1-m2-cA 89 26 0.1023 0.1011 0.3462 6.1 2qsw-a1-m1-cA_2qsw-a1-m2-cA
26 2qsw-a1-m1-cA 89 26 0.1023 0.1011 0.3462 6.1 2qsw-a1-m1-cA_2qsw-a1-m2-cA
27 2e0n-a1-m1-cA 229 21 0.1023 0.0393 0.4286 6.1 2e0n-a1-m1-cA_2e0n-a1-m1-cB
28 4l00-a3-m1-cB 278 36 0.1364 0.0432 0.3333 9.5 4l00-a3-m1-cA_4l00-a3-m1-cB
29 1qvr-a2-m2-cA 803 32 0.1023 0.0112 0.2812 9.5 1qvr-a2-m1-cC_1qvr-a2-m2-cA
30 1qvr-a2-m1-cC 803 32 0.1023 0.0112 0.2812 9.5 1qvr-a2-m1-cB_1qvr-a2-m1-cC, 1qvr-a2-m1-cC_1qvr-a2-m2-cA
31 1qvr-a2-m1-cB 803 32 0.1023 0.0112 0.2812 9.5 1qvr-a2-m1-cB_1qvr-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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