Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=88)
SRTACKRCRLKKIKCDQEFPSCKRCAKLEVPCVSLDPATGKDVPRSYVFFLEDRLAVMMR
VLKEYGVDPTKIRGNIPATSDDEPFDLK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1pyi-a1-m1-cA 88 88 1.0000 1.0000 1.0000 2.20e-60 1pyi-a1-m1-cB_1pyi-a1-m1-cA
2 1pyi-a1-m1-cB 70 70 0.7955 1.0000 1.0000 2.75e-46 1pyi-a1-m1-cB_1pyi-a1-m1-cA
3 3coq-a1-m1-cB 89 53 0.2386 0.2360 0.3962 0.001 3coq-a1-m1-cA_3coq-a1-m1-cB
4 3coq-a1-m1-cA 89 53 0.2386 0.2360 0.3962 0.001 3coq-a1-m1-cA_3coq-a1-m1-cB
5 2ere-a1-m1-cB 60 59 0.2386 0.3500 0.3559 0.11 2ere-a1-m1-cA_2ere-a1-m1-cB
6 2ere-a1-m1-cA 60 59 0.2386 0.3500 0.3559 0.11 2ere-a1-m1-cA_2ere-a1-m1-cB
7 1hwt-a2-m1-cG 70 27 0.1364 0.1714 0.4444 0.51 1hwt-a2-m1-cG_1hwt-a2-m1-cH
8 1hwt-a2-m1-cH 73 27 0.1364 0.1644 0.4444 0.56 1hwt-a2-m1-cG_1hwt-a2-m1-cH
9 8ewy-a1-m1-cB 1049 36 0.1364 0.0114 0.3333 1.4 8ewy-a1-m1-cA_8ewy-a1-m1-cB
10 8ewy-a1-m1-cA 1049 36 0.1364 0.0114 0.3333 1.4 8ewy-a1-m1-cA_8ewy-a1-m1-cB
11 7t6f-a1-m1-cB 1045 36 0.1364 0.0115 0.3333 1.5 7t6f-a1-m1-cA_7t6f-a1-m1-cB
12 7t6f-a1-m1-cA 1045 36 0.1364 0.0115 0.3333 1.5 7t6f-a1-m1-cA_7t6f-a1-m1-cB
13 2pjr-a1-m1-cA 542 35 0.1591 0.0258 0.4000 1.9 2pjr-a1-m1-cA_2pjr-a1-m1-cF
14 2pjr-a1-m1-cF 544 35 0.1591 0.0257 0.4000 1.9 2pjr-a1-m1-cA_2pjr-a1-m1-cF
15 1ajy-a1-m1-cB 71 53 0.1932 0.2394 0.3208 2.3 1ajy-a1-m1-cA_1ajy-a1-m1-cB
16 1ajy-a1-m1-cA 71 53 0.1932 0.2394 0.3208 2.3 1ajy-a1-m1-cA_1ajy-a1-m1-cB
17 1zme-a1-m1-cD 70 52 0.1932 0.2429 0.3269 2.4 1zme-a1-m1-cC_1zme-a1-m1-cD
18 1zme-a1-m1-cC 70 52 0.1932 0.2429 0.3269 2.4 1zme-a1-m1-cC_1zme-a1-m1-cD
19 7ep9-a1-m1-cG 660 23 0.1023 0.0136 0.3913 4.1 7ep9-a1-m1-cA_7ep9-a1-m1-cG, 7ep9-a1-m1-cB_7ep9-a1-m1-cG
20 7ep9-a1-m1-cB 660 23 0.1023 0.0136 0.3913 4.1 7ep9-a1-m1-cB_7ep9-a1-m1-cG
21 7ep9-a1-m1-cA 660 23 0.1023 0.0136 0.3913 4.1 7ep9-a1-m1-cA_7ep9-a1-m1-cG
22 6su1-a1-m1-cA 439 60 0.2159 0.0433 0.3167 4.6 6su1-a1-m1-cA_6su1-a1-m1-cD
23 2h6r-a2-m1-cG 200 36 0.1250 0.0550 0.3056 5.7 2h6r-a2-m1-cG_2h6r-a2-m1-cH
24 2e0n-a1-m1-cB 238 21 0.1023 0.0378 0.4286 5.7 2e0n-a1-m1-cA_2e0n-a1-m1-cB
25 2qsw-a1-m2-cA 89 26 0.1023 0.1011 0.3462 6.1 2qsw-a1-m1-cA_2qsw-a1-m2-cA
26 2qsw-a1-m1-cA 89 26 0.1023 0.1011 0.3462 6.1 2qsw-a1-m1-cA_2qsw-a1-m2-cA
27 2e0n-a1-m1-cA 229 21 0.1023 0.0393 0.4286 6.1 2e0n-a1-m1-cA_2e0n-a1-m1-cB
28 4l00-a3-m1-cB 278 36 0.1364 0.0432 0.3333 9.5 4l00-a3-m1-cA_4l00-a3-m1-cB
29 1qvr-a2-m2-cA 803 32 0.1023 0.0112 0.2812 9.5 1qvr-a2-m1-cC_1qvr-a2-m2-cA
30 1qvr-a2-m1-cC 803 32 0.1023 0.0112 0.2812 9.5 1qvr-a2-m1-cB_1qvr-a2-m1-cC, 1qvr-a2-m1-cC_1qvr-a2-m2-cA
31 1qvr-a2-m1-cB 803 32 0.1023 0.0112 0.2812 9.5 1qvr-a2-m1-cB_1qvr-a2-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600