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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=51)
SSALDKLKEFGNTLEDKARELISRIKQSELSAKMREWFSETFQKVKEKLKI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6dvu-a1-m1-cA 51 51 1.0000 1.0000 1.0000 5.40e-30 6dvu-a1-m1-cA_6dvu-a1-m2-cB
2 6dvu-a1-m2-cB 53 51 1.0000 0.9623 1.0000 5.48e-30 6dvu-a1-m1-cA_6dvu-a1-m2-cB
3 6nf3-a1-m2-cB 51 50 0.9804 0.9804 1.0000 2.87e-29 6nf3-a1-m1-cA_6nf3-a1-m2-cB
4 6dz6-a1-m1-cB 50 50 0.9804 1.0000 1.0000 2.96e-29 6dz6-a1-m1-cB_6dz6-a1-m1-cA
5 6dz6-a1-m1-cA 52 50 0.9804 0.9615 1.0000 3.00e-29 6dz6-a1-m1-cB_6dz6-a1-m1-cA
6 6nf3-a1-m1-cA 46 46 0.9020 1.0000 1.0000 1.12e-26 6nf3-a1-m1-cA_6nf3-a1-m2-cB
7 2fck-a1-m2-cA 171 25 0.1961 0.0585 0.4000 3.5 2fck-a1-m1-cA_2fck-a1-m2-cA
8 2fck-a1-m1-cA 171 25 0.1961 0.0585 0.4000 3.5 2fck-a1-m1-cA_2fck-a1-m2-cA
9 6oaw-a1-m1-cB 382 41 0.2549 0.0340 0.3171 6.2 6oaw-a1-m1-cA_6oaw-a1-m1-cB
10 3drw-a1-m1-cA 460 20 0.1765 0.0196 0.4500 7.4 3drw-a1-m1-cB_3drw-a1-m1-cA
11 3drw-a1-m1-cB 450 20 0.1765 0.0200 0.4500 7.7 3drw-a1-m1-cB_3drw-a1-m1-cA
12 6oaw-a1-m1-cA 379 29 0.2157 0.0290 0.3793 8.0 6oaw-a1-m1-cA_6oaw-a1-m1-cB
13 3kzp-a1-m1-cB 228 29 0.2353 0.0526 0.4138 9.8 3kzp-a1-m1-cA_3kzp-a1-m1-cB
14 3kzp-a1-m1-cA 228 29 0.2353 0.0526 0.4138 9.8 3kzp-a1-m1-cA_3kzp-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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