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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
SSDLEQLCSHVNEKIGNIKKTLSLRNCGQEPTLKTVLNKIGDEIIVINELLNKLELEIQY
QEQTNNSLKELCESLEEDYKDIEHLK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4aj5-a1-m1-cG 86 86 1.0000 1.0000 1.0000 1.44e-55 4aj5-a1-m1-cC_4aj5-a1-m1-cG
2 4aj5-a1-m1-cC 79 79 0.9186 1.0000 1.0000 3.09e-50 4aj5-a1-m1-cC_4aj5-a1-m1-cG
3 7eaa-a1-m1-cD 110 78 0.3256 0.2545 0.3590 1.9 7eaa-a1-m1-cD_7eaa-a1-m1-cC
4 7eaa-a1-m1-cC 114 77 0.3256 0.2456 0.3636 2.2 7eaa-a1-m1-cD_7eaa-a1-m1-cC
5 1vkm-a3-m1-cF 282 65 0.2442 0.0745 0.3231 3.2 1vkm-a3-m1-cB_1vkm-a3-m1-cF, 1vkm-a3-m1-cE_1vkm-a3-m1-cF
6 1vkm-a3-m1-cE 282 65 0.2442 0.0745 0.3231 3.2 1vkm-a3-m1-cC_1vkm-a3-m1-cE, 1vkm-a3-m1-cE_1vkm-a3-m1-cF
7 1vkm-a3-m1-cC 282 65 0.2442 0.0745 0.3231 3.2 1vkm-a3-m1-cC_1vkm-a3-m1-cE
8 1vkm-a3-m1-cB 282 65 0.2442 0.0745 0.3231 3.2 1vkm-a3-m1-cB_1vkm-a3-m1-cF
9 7ocn-a1-m1-cB 679 34 0.1628 0.0206 0.4118 3.4 7ocn-a1-m1-cB_7ocn-a1-m1-cA
10 6vab-a1-m1-cB 276 77 0.2326 0.0725 0.2597 7.4 6vab-a1-m1-cB_6vab-a1-m1-cD
11 6nj1-a1-m2-cA 259 41 0.1395 0.0463 0.2927 9.5 6nj1-a1-m1-cA_6nj1-a1-m2-cA
12 6nj1-a1-m1-cA 259 41 0.1395 0.0463 0.2927 9.5 6nj1-a1-m1-cA_6nj1-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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