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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
SSDTPEGVRSGAGAVRDAGGAFGKKEQADEERYFRARAREQLAALKKHHENEISHHVKEI
ERLQKEIERHKQSIK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6j5k-a1-m1-cJ 78 75 1.0000 0.9615 1.0000 4.73e-49 6j5k-a1-m1-cCJ_6j5k-a1-m1-cJ
2 6j5k-a1-m1-cCJ 75 75 1.0000 1.0000 1.0000 5.12e-49 6j5k-a1-m1-cCJ_6j5k-a1-m1-cJ
3 1gmj-a1-m1-cA 65 57 0.6933 0.8000 0.9123 6.12e-31 1gmj-a1-m1-cB_1gmj-a1-m1-cA
4 1gmj-a1-m1-cB 60 56 0.6800 0.8500 0.9107 5.89e-30 1gmj-a1-m1-cB_1gmj-a1-m1-cA
5 1gmj-a2-m1-cC 59 56 0.6800 0.8644 0.9107 6.40e-30 1gmj-a2-m1-cD_1gmj-a2-m1-cC
6 1gmj-a2-m1-cD 56 53 0.6400 0.8571 0.9057 2.90e-27 1gmj-a2-m1-cD_1gmj-a2-m1-cC
7 1hf9-a1-m1-cB 41 32 0.4133 0.7561 0.9688 1.19e-14 1hf9-a1-m1-cA_1hf9-a1-m1-cB
8 1hf9-a1-m1-cA 41 32 0.4133 0.7561 0.9688 1.19e-14 1hf9-a1-m1-cA_1hf9-a1-m1-cB
9 7dtl-a1-m1-cB 61 56 0.3067 0.3770 0.4107 3.23e-05 7dtl-a1-m1-cA_7dtl-a1-m1-cB
10 7dtl-a1-m1-cA 61 56 0.3067 0.3770 0.4107 3.23e-05 7dtl-a1-m1-cA_7dtl-a1-m1-cB
11 7y8n-a1-m1-cB 287 22 0.1467 0.0383 0.5000 2.7 7y8n-a1-m1-cA_7y8n-a1-m1-cB
12 7y8n-a1-m1-cA 287 22 0.1467 0.0383 0.5000 2.7 7y8n-a1-m1-cA_7y8n-a1-m1-cB
13 6mgw-a1-m1-cB 634 24 0.0933 0.0110 0.2917 3.4 6mgw-a1-m1-cA_6mgw-a1-m1-cB
14 6mgw-a1-m1-cA 634 24 0.0933 0.0110 0.2917 3.4 6mgw-a1-m1-cA_6mgw-a1-m1-cB
15 6ijz-a1-m1-cB 683 24 0.0933 0.0102 0.2917 3.4 6ijz-a1-m1-cA_6ijz-a1-m1-cB
16 6ijz-a1-m1-cA 683 24 0.0933 0.0102 0.2917 3.4 6ijz-a1-m1-cA_6ijz-a1-m1-cB
17 2iak-a3-m3-cA 198 42 0.1867 0.0707 0.3333 4.8 2iak-a3-m2-cA_2iak-a3-m3-cA
18 2iak-a3-m2-cA 198 42 0.1867 0.0707 0.3333 4.8 2iak-a3-m2-cA_2iak-a3-m3-cA
19 2iak-a2-m6-cA 198 42 0.1867 0.0707 0.3333 4.8 2iak-a2-m2-cA_2iak-a2-m6-cA
20 2iak-a2-m2-cA 198 42 0.1867 0.0707 0.3333 4.8 2iak-a2-m2-cA_2iak-a2-m6-cA
21 1k38-a1-m1-cA 238 30 0.1733 0.0546 0.4333 5.6 1k38-a1-m1-cB_1k38-a1-m1-cA
22 3kph-a1-m1-cB 194 46 0.1467 0.0567 0.2391 5.7 3kph-a1-m1-cB_3kph-a1-m1-cA
23 1k38-a1-m1-cB 234 30 0.1733 0.0556 0.4333 5.9 1k38-a1-m1-cB_1k38-a1-m1-cA
24 3kph-a1-m1-cA 196 46 0.1467 0.0561 0.2391 5.9 3kph-a1-m1-cB_3kph-a1-m1-cA
25 6jix-a2-m1-cC 446 35 0.1600 0.0269 0.3429 8.5 6jix-a2-m1-cC_6jix-a2-m1-cA
26 6jix-a2-m1-cA 447 35 0.1600 0.0268 0.3429 8.5 6jix-a2-m1-cC_6jix-a2-m1-cA
27 3mzo-a1-m2-cA 205 40 0.1467 0.0537 0.2750 9.2 3mzo-a1-m2-cA_3mzo-a1-m2-cB, 3mzo-a1-m2-cC_3mzo-a1-m2-cA
28 1t3j-a1-m2-cA 62 30 0.1733 0.2097 0.4333 9.3 1t3j-a1-m1-cA_1t3j-a1-m2-cA
29 1t3j-a1-m1-cA 62 30 0.1733 0.2097 0.4333 9.3 1t3j-a1-m1-cA_1t3j-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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