Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=61)
SSEYIVEKFLGKRYLRGRPQYLTKWEGYPIEQCTWEPLENLGKCMTLIADYEAELFQQSR
E

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 7vrf-a1-m1-cA 61 61 1.0000 1.0000 1.0000 8.38e-41 7vrf-a1-m1-cB_7vrf-a1-m1-cA
2 7vrf-a1-m1-cB 60 60 0.9836 1.0000 1.0000 3.02e-40 7vrf-a1-m1-cB_7vrf-a1-m1-cA
3 4quf-a2-m1-cC 61 59 0.5738 0.5738 0.5932 4.89e-25 4quf-a2-m1-cD_4quf-a2-m1-cC
4 4quf-a2-m1-cD 58 55 0.5574 0.5862 0.6182 1.89e-24 4quf-a2-m1-cD_4quf-a2-m1-cC
5 3f2u-a1-m2-cA 51 50 0.4098 0.4902 0.5000 7.26e-12 3f2u-a1-m1-cA_3f2u-a1-m2-cA
6 3f2u-a1-m1-cA 51 50 0.4098 0.4902 0.5000 7.26e-12 3f2u-a1-m1-cA_3f2u-a1-m2-cA
7 3dm1-a5-m1-cG 53 49 0.3443 0.3962 0.4286 1.43e-08 3dm1-a5-m1-cA_3dm1-a5-m1-cG, 3dm1-a5-m1-cC_3dm1-a5-m1-cG, 3dm1-a5-m1-cE_3dm1-a5-m1-cG
8 3dm1-a5-m1-cE 53 49 0.3443 0.3962 0.4286 1.43e-08 3dm1-a5-m1-cC_3dm1-a5-m1-cE, 3dm1-a5-m1-cE_3dm1-a5-m1-cG
9 3dm1-a5-m1-cC 52 49 0.3443 0.4038 0.4286 1.61e-08 3dm1-a5-m1-cC_3dm1-a5-m1-cE, 3dm1-a5-m1-cC_3dm1-a5-m1-cG
10 3dm1-a5-m1-cA 52 49 0.3443 0.4038 0.4286 1.61e-08 3dm1-a5-m1-cA_3dm1-a5-m1-cG
11 4x3t-a3-m1-cD 62 51 0.3115 0.3065 0.3725 5.70e-06 4x3t-a3-m1-cE_4x3t-a3-m1-cD
12 4x3t-a2-m1-cC 62 51 0.3115 0.3065 0.3725 5.70e-06 4x3t-a2-m1-cF_4x3t-a2-m1-cC
13 5ejw-a2-m2-cA 80 51 0.3115 0.2375 0.3725 7.23e-06 5ejw-a2-m1-cA_5ejw-a2-m2-cA
14 5ejw-a2-m1-cA 80 51 0.3115 0.2375 0.3725 7.23e-06 5ejw-a2-m1-cA_5ejw-a2-m2-cA
15 4x3t-a2-m1-cF 56 38 0.2623 0.2857 0.4211 9.89e-06 4x3t-a2-m1-cF_4x3t-a2-m1-cC
16 4x3t-a3-m1-cE 51 38 0.2623 0.3137 0.4211 1.06e-05 4x3t-a3-m1-cE_4x3t-a3-m1-cD
17 3h91-a3-m2-cB 52 46 0.2787 0.3269 0.3696 2.57e-05 3h91-a3-m1-cB_3h91-a3-m2-cB
18 3h91-a3-m1-cB 52 46 0.2787 0.3269 0.3696 2.57e-05 3h91-a3-m1-cB_3h91-a3-m2-cB
19 7slw-a2-m1-cE 56 51 0.2951 0.3214 0.3529 7.96e-05 7slw-a2-m1-cE_7slw-a2-m1-cF
20 7slw-a2-m1-cF 57 51 0.2951 0.3158 0.3529 8.12e-05 7slw-a2-m1-cE_7slw-a2-m1-cF
21 4ft2-a1-m1-cB 670 56 0.3279 0.0299 0.3571 1.73e-04 4ft2-a1-m1-cB_4ft2-a1-m1-cA
22 5jjz-a2-m2-cA 59 46 0.2951 0.3051 0.3913 2.87e-04 5jjz-a2-m1-cA_5jjz-a2-m2-cA
23 5jjz-a2-m1-cA 59 46 0.2951 0.3051 0.3913 2.87e-04 5jjz-a2-m1-cA_5jjz-a2-m2-cA
24 4ft2-a1-m1-cA 674 54 0.3115 0.0282 0.3519 4.27e-04 4ft2-a1-m1-cB_4ft2-a1-m1-cA
25 3lwe-a4-m1-cB 59 53 0.2459 0.2542 0.2830 0.001 3lwe-a4-m1-cB_3lwe-a4-m1-cA
26 3lwe-a3-m2-cB 59 53 0.2459 0.2542 0.2830 0.001 3lwe-a3-m2-cB_3lwe-a3-m1-cA
27 3lwe-a4-m1-cA 61 53 0.2459 0.2459 0.2830 0.001 3lwe-a4-m1-cB_3lwe-a4-m1-cA
28 3lwe-a3-m1-cA 61 53 0.2459 0.2459 0.2830 0.001 3lwe-a3-m2-cB_3lwe-a3-m1-cA
29 1pfb-a2-m2-cA 55 38 0.2459 0.2727 0.3947 0.002 1pfb-a2-m1-cA_1pfb-a2-m2-cA
30 1pfb-a2-m1-cA 55 38 0.2459 0.2727 0.3947 0.002 1pfb-a2-m1-cA_1pfb-a2-m2-cA
31 2b2w-a1-m1-cA 177 20 0.1639 0.0565 0.5000 0.11 2b2w-a1-m1-cB_2b2w-a1-m1-cA, 2b2w-a1-m1-cC_2b2w-a1-m1-cA
32 2b2w-a1-m1-cA 177 25 0.1967 0.0678 0.4800 2.4 2b2w-a1-m1-cB_2b2w-a1-m1-cA, 2b2w-a1-m1-cC_2b2w-a1-m1-cA
33 2b2w-a1-m1-cB 175 20 0.1639 0.0571 0.5000 0.11 2b2w-a1-m1-cB_2b2w-a1-m1-cA
34 2b2w-a1-m1-cB 175 25 0.1967 0.0686 0.4800 2.3 2b2w-a1-m1-cB_2b2w-a1-m1-cA
35 4d90-a3-m1-cA 127 26 0.1803 0.0866 0.4231 0.28 4d90-a3-m1-cB_4d90-a3-m1-cA
36 4d90-a3-m1-cB 126 26 0.1803 0.0873 0.4231 0.28 4d90-a3-m1-cB_4d90-a3-m1-cA
37 4cgk-a1-m2-cA 351 18 0.1639 0.0285 0.5556 0.28 4cgk-a1-m2-cB_4cgk-a1-m2-cA
38 4cgk-a1-m1-cA 351 18 0.1639 0.0285 0.5556 0.28 4cgk-a1-m2-cB_4cgk-a1-m1-cA
39 4cgk-a1-m2-cB 348 18 0.1639 0.0287 0.5556 0.29 4cgk-a1-m1-cB_4cgk-a1-m2-cB, 4cgk-a1-m2-cB_4cgk-a1-m1-cA, 4cgk-a1-m2-cB_4cgk-a1-m2-cA
40 4cgk-a1-m1-cB 348 18 0.1639 0.0287 0.5556 0.29 4cgk-a1-m1-cB_4cgk-a1-m2-cB
41 2b2w-a1-m1-cC 86 25 0.1967 0.1395 0.4800 1.2 2b2w-a1-m1-cC_2b2w-a1-m1-cA
42 5fyd-a1-m1-cB 252 35 0.2459 0.0595 0.4286 3.7 5fyd-a1-m1-cB_5fyd-a1-m1-cA
43 4whn-a2-m1-cB 169 35 0.2295 0.0828 0.4000 4.7 4whn-a2-m1-cD_4whn-a2-m1-cB
44 4whn-a2-m1-cD 168 35 0.2295 0.0833 0.4000 4.9 4whn-a2-m1-cD_4whn-a2-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600