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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
SSGVDLGTENLYFQSMPRSIRFTAEEGDLGFTLRGNAPVQVHFLDPYCSASVAGAREGDY
IVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMKVVSLL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2vsv-a1-m1-cB 104 97 1.0000 0.9327 1.0000 3.56e-69 2vsv-a1-m1-cA_2vsv-a1-m1-cB
2 2vsv-a1-m1-cA 97 97 1.0000 1.0000 1.0000 7.26e-69 2vsv-a1-m1-cA_2vsv-a1-m1-cB
3 2fne-a4-m2-cC 104 86 0.3093 0.2885 0.3488 5.32e-07 2fne-a4-m1-cB_2fne-a4-m2-cC
4 3qe1-a1-m2-cA 102 96 0.2990 0.2843 0.3021 2.70e-06 3qe1-a1-m1-cA_3qe1-a1-m2-cA
5 3qe1-a1-m1-cA 102 96 0.2990 0.2843 0.3021 2.70e-06 3qe1-a1-m1-cA_3qe1-a1-m2-cA
6 3qdo-a1-m2-cA 109 96 0.2990 0.2661 0.3021 2.81e-06 3qdo-a1-m1-cA_3qdo-a1-m2-cA
7 3qdo-a1-m1-cA 109 96 0.2990 0.2661 0.3021 2.81e-06 3qdo-a1-m1-cA_3qdo-a1-m2-cA
8 2iwp-a1-m1-cB 106 98 0.3299 0.3019 0.3265 6.58e-06 2iwp-a1-m1-cA_2iwp-a1-m1-cB
9 4e38-a1-m1-cC 227 21 0.1753 0.0749 0.8095 5.09e-04 4e38-a1-m1-cB_4e38-a1-m1-cC
10 2nz6-a2-m3-cA 296 16 0.1649 0.0541 1.0000 5.09e-04 2nz6-a2-m2-cA_2nz6-a2-m3-cA
11 2nz6-a2-m2-cA 296 16 0.1649 0.0541 1.0000 5.09e-04 2nz6-a2-m2-cA_2nz6-a2-m3-cA
12 5tyt-a2-m1-cC 87 68 0.2165 0.2414 0.3088 5.68e-04 5tyt-a2-m1-cC_5tyt-a2-m2-cD
13 5tyt-a2-m2-cD 89 68 0.2165 0.2360 0.3088 5.95e-04 5tyt-a2-m1-cC_5tyt-a2-m2-cD
14 4lob-a1-m2-cA 326 16 0.1649 0.0491 1.0000 7.21e-04 4lob-a1-m1-cA_4lob-a1-m2-cA
15 4lob-a1-m1-cA 326 16 0.1649 0.0491 1.0000 7.21e-04 4lob-a1-m1-cA_4lob-a1-m2-cA
16 6nek-a1-m2-cA 86 58 0.2474 0.2791 0.4138 0.001 6nek-a1-m1-cA_6nek-a1-m2-cA
17 6nek-a1-m1-cA 86 58 0.2474 0.2791 0.4138 0.001 6nek-a1-m1-cA_6nek-a1-m2-cA
18 2fne-a4-m1-cB 100 82 0.2680 0.2600 0.3171 0.001 2fne-a4-m1-cB_2fne-a4-m2-cC
19 1u9d-a3-m5-cB 120 27 0.1649 0.1333 0.5926 0.002 1u9d-a3-m4-cB_1u9d-a3-m5-cB
20 1u9d-a3-m4-cB 120 27 0.1649 0.1333 0.5926 0.002 1u9d-a3-m4-cB_1u9d-a3-m5-cB
21 1u9d-a1-m1-cB 120 27 0.1649 0.1333 0.5926 0.002 1u9d-a1-m1-cA_1u9d-a1-m1-cB
22 1u9d-a1-m1-cA 120 27 0.1649 0.1333 0.5926 0.002 1u9d-a1-m1-cA_1u9d-a1-m1-cB
23 4e1j-a2-m1-cC 493 15 0.1546 0.0304 1.0000 0.004 4e1j-a2-m1-cB_4e1j-a2-m1-cC
24 2x57-a1-m1-cB 104 15 0.1546 0.1442 1.0000 0.005 2x57-a1-m2-cC_2x57-a1-m1-cB
25 3k2j-a3-m1-cB 121 14 0.1443 0.1157 1.0000 0.006 3k2j-a3-m1-cA_3k2j-a3-m1-cB
26 3k2j-a3-m1-cA 121 14 0.1443 0.1157 1.0000 0.006 3k2j-a3-m1-cA_3k2j-a3-m1-cB
27 2aua-a1-m1-cB 205 15 0.1546 0.0732 1.0000 0.007 2aua-a1-m1-cA_2aua-a1-m1-cB
28 4b9d-a1-m1-cB 295 19 0.1443 0.0475 0.7368 0.007 4b9d-a1-m1-cA_4b9d-a1-m1-cB
29 4e69-a2-m1-cA 310 14 0.1443 0.0452 1.0000 0.011 4e69-a2-m1-cA_4e69-a2-m2-cB
30 4e69-a1-m1-cA 310 14 0.1443 0.0452 1.0000 0.011 4e69-a1-m1-cA_4e69-a1-m1-cB
31 4e69-a2-m2-cB 311 14 0.1443 0.0450 1.0000 0.011 4e69-a2-m1-cA_4e69-a2-m2-cB
32 4e69-a1-m1-cB 311 14 0.1443 0.0450 1.0000 0.011 4e69-a1-m1-cA_4e69-a1-m1-cB
33 5ztn-a1-m1-cB 395 14 0.1443 0.0354 1.0000 0.018 5ztn-a1-m1-cA_5ztn-a1-m1-cB
34 5ztn-a1-m1-cA 395 14 0.1443 0.0354 1.0000 0.018 5ztn-a1-m1-cA_5ztn-a1-m1-cB
35 4ehi-a2-m2-cB 493 40 0.1856 0.0365 0.4500 0.028 4ehi-a2-m1-cA_4ehi-a2-m2-cB
36 4ehi-a1-m1-cB 493 40 0.1856 0.0365 0.4500 0.028 4ehi-a1-m1-cA_4ehi-a1-m1-cB
37 7pvi-a1-m1-cAAA 199 13 0.1340 0.0653 1.0000 0.032 7pvi-a1-m1-cBBB_7pvi-a1-m1-cAAA
38 3f0w-a2-m2-cA 153 43 0.2062 0.1307 0.4651 0.041 3f0w-a2-m1-cA_3f0w-a2-m2-cA
39 3f0w-a2-m1-cA 153 43 0.2062 0.1307 0.4651 0.041 3f0w-a2-m1-cA_3f0w-a2-m2-cA
40 7l1i-a1-m2-cA 169 13 0.1340 0.0769 1.0000 0.047 7l1i-a1-m1-cA_7l1i-a1-m2-cA
41 7l1i-a1-m1-cA 169 13 0.1340 0.0769 1.0000 0.047 7l1i-a1-m1-cA_7l1i-a1-m2-cA
42 2x57-a1-m2-cC 102 13 0.1340 0.1275 1.0000 0.052 2x57-a1-m2-cA_2x57-a1-m2-cC, 2x57-a1-m2-cC_2x57-a1-m1-cB
43 2x57-a1-m2-cA 102 13 0.1340 0.1275 1.0000 0.052 2x57-a1-m2-cA_2x57-a1-m2-cC
44 4jwt-a1-m2-cA 235 13 0.1340 0.0553 1.0000 0.068 4jwt-a1-m1-cA_4jwt-a1-m2-cA
45 4jwt-a1-m1-cA 235 13 0.1340 0.0553 1.0000 0.068 4jwt-a1-m1-cA_4jwt-a1-m2-cA
46 1fcf-a2-m3-cA 387 46 0.1753 0.0439 0.3696 0.082 1fcf-a2-m2-cA_1fcf-a2-m3-cA
47 1fcf-a2-m2-cA 387 46 0.1753 0.0439 0.3696 0.082 1fcf-a2-m2-cA_1fcf-a2-m3-cA
48 2omk-a1-m1-cA 220 13 0.1340 0.0591 1.0000 0.097 2omk-a1-m1-cB_2omk-a1-m1-cA
49 4ehi-a2-m1-cA 472 39 0.1753 0.0360 0.4359 0.11 4ehi-a2-m1-cA_4ehi-a2-m2-cB
50 4ehi-a1-m1-cA 472 39 0.1753 0.0360 0.4359 0.11 4ehi-a1-m1-cA_4ehi-a1-m1-cB
51 4az9-a2-m3-cA 111 30 0.1856 0.1622 0.6000 0.16 4az9-a2-m3-cA_4az9-a2-m1-cB
52 4az9-a2-m1-cB 114 30 0.1856 0.1579 0.6000 0.16 4az9-a2-m3-cA_4az9-a2-m1-cB
53 6a9y-a1-m2-cA 284 23 0.1546 0.0528 0.6522 0.19 6a9y-a1-m1-cA_6a9y-a1-m2-cA
54 6a9y-a1-m1-cA 284 23 0.1546 0.0528 0.6522 0.19 6a9y-a1-m1-cA_6a9y-a1-m2-cA
55 4lls-a1-m1-cA 300 12 0.1237 0.0400 1.0000 0.24 4lls-a1-m1-cB_4lls-a1-m1-cA
56 7du3-a1-m2-cB 327 12 0.1237 0.0367 1.0000 0.29 7du3-a1-m1-cA_7du3-a1-m2-cB
57 3r69-a3-m1-cA 85 70 0.1546 0.1765 0.2143 0.48 3r69-a3-m1-cA_3r69-a3-m1-cB
58 4yqy-a1-m1-cA 240 27 0.1443 0.0583 0.5185 1.2 4yqy-a1-m2-cB_4yqy-a1-m1-cA
59 5ujs-a1-m1-cB 431 11 0.1134 0.0255 1.0000 1.3 5ujs-a1-m1-cA_5ujs-a1-m1-cB
60 4k7g-a1-m1-cD 352 11 0.1134 0.0312 1.0000 1.6 4k7g-a1-m1-cB_4k7g-a1-m1-cD
61 3i7u-a1-m1-cB 133 41 0.1546 0.1128 0.3659 1.6 3i7u-a1-m1-cB_3i7u-a1-m1-cC, 3i7u-a1-m1-cB_3i7u-a1-m1-cD
62 3i7u-a1-m1-cD 134 41 0.1546 0.1119 0.3659 1.8 3i7u-a1-m1-cB_3i7u-a1-m1-cD, 3i7u-a1-m1-cC_3i7u-a1-m1-cD
63 3i7u-a1-m1-cC 134 41 0.1546 0.1119 0.3659 1.8 3i7u-a1-m1-cB_3i7u-a1-m1-cC, 3i7u-a1-m1-cC_3i7u-a1-m1-cD
64 3hmh-a2-m2-cA 139 16 0.1134 0.0791 0.6875 3.2 3hmh-a2-m1-cA_3hmh-a2-m2-cA
65 3hmh-a2-m1-cA 139 16 0.1134 0.0791 0.6875 3.2 3hmh-a2-m1-cA_3hmh-a2-m2-cA
66 4b9d-a1-m1-cA 290 15 0.1031 0.0345 0.6667 4.2 4b9d-a1-m1-cA_4b9d-a1-m1-cB
67 3ec8-a2-m2-cA 139 10 0.1031 0.0719 1.0000 4.6 3ec8-a2-m1-cA_3ec8-a2-m2-cA
68 3ec8-a2-m1-cA 139 10 0.1031 0.0719 1.0000 4.6 3ec8-a2-m1-cA_3ec8-a2-m2-cA
69 6xig-a1-m1-cA 379 10 0.1031 0.0264 1.0000 4.7 6xig-a1-m1-cA_6xig-a1-m1-cB
70 6xig-a1-m1-cB 383 10 0.1031 0.0261 1.0000 4.7 6xig-a1-m1-cA_6xig-a1-m1-cB
71 7o8c-a1-m1-cB 579 10 0.1031 0.0173 1.0000 4.9 7o8c-a1-m1-cB_7o8c-a1-m1-cA
72 7o8c-a1-m1-cA 582 10 0.1031 0.0172 1.0000 4.9 7o8c-a1-m1-cB_7o8c-a1-m1-cA
73 3cyn-a4-m1-cC 176 10 0.1031 0.0568 1.0000 6.3 3cyn-a4-m1-cB_3cyn-a4-m1-cC
74 1pdr-a1-m6-cA 96 74 0.1959 0.1979 0.2568 6.7 1pdr-a1-m2-cA_1pdr-a1-m6-cA, 1pdr-a1-m3-cA_1pdr-a1-m6-cA, 1pdr-a1-m5-cA_1pdr-a1-m6-cA
75 1pdr-a1-m5-cA 96 74 0.1959 0.1979 0.2568 6.7 1pdr-a1-m5-cA_1pdr-a1-m6-cA
76 1pdr-a1-m3-cA 96 74 0.1959 0.1979 0.2568 6.7 1pdr-a1-m3-cA_1pdr-a1-m6-cA
77 1pdr-a1-m2-cA 96 74 0.1959 0.1979 0.2568 6.7 1pdr-a1-m2-cA_1pdr-a1-m6-cA
78 3nnj-a1-m1-cA 298 10 0.1031 0.0336 1.0000 7.7 3nnj-a1-m1-cB_3nnj-a1-m1-cA
79 3gvu-a2-m2-cA 271 12 0.1031 0.0369 0.8333 7.8 3gvu-a2-m1-cA_3gvu-a2-m2-cA
80 3gvu-a2-m1-cA 271 12 0.1031 0.0369 0.8333 7.8 3gvu-a2-m1-cA_3gvu-a2-m2-cA
81 2r78-a2-m1-cC 115 10 0.1031 0.0870 1.0000 9.0 2r78-a2-m1-cD_2r78-a2-m1-cC
82 4mzw-a1-m1-cA 270 29 0.1443 0.0519 0.4828 9.6 4mzw-a1-m1-cB_4mzw-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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