Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=62)
SSHTLKTANSYTDVTVSNSTKKAIRESNQYTDHKHQLENRLDKLEKRLLKLLASSAALNS
LF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3lt6-a2-m1-cF 62 62 1.0000 1.0000 1.0000 1.55e-38 3lt6-a2-m1-cE_3lt6-a2-m1-cF
2 3lt6-a2-m1-cE 56 55 0.8871 0.9821 1.0000 2.36e-33 3lt6-a2-m1-cE_3lt6-a2-m1-cF
3 3h7z-a1-m3-cA 61 61 0.9032 0.9180 0.9180 2.06e-32 3h7z-a1-m2-cA_3h7z-a1-m3-cA
4 3h7z-a1-m2-cA 61 61 0.9032 0.9180 0.9180 2.06e-32 3h7z-a1-m2-cA_3h7z-a1-m3-cA
5 3h7x-a1-m1-cB 51 51 0.7097 0.8627 0.8627 6.43e-24 3h7x-a1-m1-cB_3h7x-a1-m1-cC
6 3h7x-a1-m1-cC 51 51 0.7097 0.8627 0.8627 1.27e-23 3h7x-a1-m1-cB_3h7x-a1-m1-cC
7 2lme-a1-m1-cC 105 31 0.3710 0.2190 0.7419 4.66e-07 2lme-a1-m1-cB_2lme-a1-m1-cC
8 2lme-a1-m1-cB 105 31 0.3710 0.2190 0.7419 4.66e-07 2lme-a1-m1-cB_2lme-a1-m1-cC
9 2yo3-a1-m1-cB 258 41 0.1774 0.0426 0.2683 0.58 2yo3-a1-m1-cC_2yo3-a1-m1-cB
10 2yo3-a1-m1-cC 257 41 0.1774 0.0428 0.2683 0.60 2yo3-a1-m1-cC_2yo3-a1-m1-cB
11 3ros-a1-m2-cA 449 42 0.2258 0.0312 0.3333 0.64 3ros-a1-m1-cA_3ros-a1-m2-cA
12 3ros-a1-m1-cA 449 42 0.2258 0.0312 0.3333 0.64 3ros-a1-m1-cA_3ros-a1-m2-cA
13 5jnb-a1-m1-cB 324 36 0.2097 0.0401 0.3611 2.3 5jnb-a1-m1-cB_5jnb-a1-m1-cA, 5jnb-a1-m1-cD_5jnb-a1-m1-cB
14 5jnb-a1-m1-cA 329 32 0.2097 0.0395 0.4062 2.4 5jnb-a1-m1-cB_5jnb-a1-m1-cA, 5jnb-a1-m1-cD_5jnb-a1-m1-cA
15 2pk9-a3-m1-cB 214 46 0.2097 0.0607 0.2826 2.6 2pk9-a3-m1-cB_2pk9-a3-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600