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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
SSKMSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVL
LSMQGAVDINRLCE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ahm-a1-m2-cC 74 74 1.0000 1.0000 1.0000 2.02e-47 2ahm-a1-m2-cC_2ahm-a1-m2-cB
2 2ahm-a1-m2-cB 77 74 1.0000 0.9610 1.0000 2.43e-47 2ahm-a1-m2-cC_2ahm-a1-m2-cB
3 7oyg-a1-m1-cF 62 62 0.8378 1.0000 1.0000 1.80e-37 7oyg-a1-m1-cC_7oyg-a1-m1-cF
4 7oyg-a1-m1-cC 62 62 0.8378 1.0000 1.0000 1.80e-37 7oyg-a1-m1-cC_7oyg-a1-m1-cF
5 6nhl-a1-m1-cA 225 80 0.2432 0.0800 0.2250 4.2 6nhl-a1-m1-cA_6nhl-a1-m2-cB
6 3obi-a3-m1-cC 277 52 0.2297 0.0614 0.3269 4.3 3obi-a3-m1-cC_3obi-a3-m1-cB
7 3obi-a1-m1-cD 277 52 0.2297 0.0614 0.3269 4.3 3obi-a1-m1-cC_3obi-a1-m1-cD, 3obi-a1-m1-cD_3obi-a1-m1-cB
8 3obi-a1-m1-cC 277 52 0.2297 0.0614 0.3269 4.3 3obi-a1-m1-cC_3obi-a1-m1-cD
9 3obi-a3-m1-cB 278 52 0.2297 0.0612 0.3269 4.3 3obi-a3-m1-cC_3obi-a3-m1-cB
10 3obi-a1-m1-cB 278 52 0.2297 0.0612 0.3269 4.3 3obi-a1-m1-cD_3obi-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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