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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
SSKVVLSEPRVYAEAQEIADHLKNRRAVVVNLQRIQHDQAKRIVDFLSGTVYAIGGDIQR
IGSDIFLCTPDNVDVSGTIS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3zih-a1-m1-cB 80 80 1.0000 1.0000 1.0000 2.07e-54 3zih-a1-m1-cA_3zih-a1-m1-cB
2 3zih-a1-m1-cA 79 79 0.9875 1.0000 1.0000 9.47e-54 3zih-a1-m1-cA_3zih-a1-m1-cB
3 6scs-a1-m1-cA 70 70 0.2875 0.3286 0.3286 2.41e-08 6scs-a1-m1-cB_6scs-a1-m1-cA
4 6scs-a1-m1-cB 67 60 0.2500 0.2985 0.3333 1.18e-07 6scs-a1-m1-cB_6scs-a1-m1-cA
5 2vf8-a1-m1-cA 806 36 0.1875 0.0186 0.4167 1.8 2vf8-a1-m1-cA_2vf8-a1-m1-cB
6 2vf8-a1-m1-cB 835 36 0.1875 0.0180 0.4167 1.8 2vf8-a1-m1-cA_2vf8-a1-m1-cB
7 5d9h-a1-m1-cA 290 30 0.1250 0.0345 0.3333 7.0 5d9h-a1-m1-cA_5d9h-a1-m1-cB
8 7w0i-a1-m1-cD 334 37 0.1625 0.0389 0.3514 8.1 7w0i-a1-m1-cA_7w0i-a1-m1-cD, 7w0i-a1-m1-cB_7w0i-a1-m1-cD, 7w0i-a1-m1-cC_7w0i-a1-m1-cD
9 7w0i-a1-m1-cC 334 37 0.1625 0.0389 0.3514 8.1 7w0i-a1-m1-cC_7w0i-a1-m1-cD
10 7w0i-a1-m1-cB 334 37 0.1625 0.0389 0.3514 8.1 7w0i-a1-m1-cB_7w0i-a1-m1-cD
11 7w0i-a1-m1-cA 334 37 0.1625 0.0389 0.3514 8.1 7w0i-a1-m1-cA_7w0i-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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