Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=94)
SSMPLCPIDEAIDKKIKQDFNSLFPNAIKNIGLNCWTVSSRGKLASCPEGTAVLSCSCGS
ACGSWDIREEKVCHCQCARIDWTAARCCKLQVAS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1rgx-a2-m2-cC 94 94 1.0000 1.0000 1.0000 2.86e-65 1rgx-a2-m1-cA_1rgx-a2-m2-cC, 1rgx-a2-m1-cB_1rgx-a2-m2-cC
2 1rgx-a2-m2-cB 89 89 0.9468 1.0000 1.0000 2.69e-61 1rgx-a2-m2-cA_1rgx-a2-m2-cB
3 1rgx-a2-m2-cA 89 89 0.9468 1.0000 1.0000 2.69e-61 1rgx-a2-m2-cA_1rgx-a2-m2-cB
4 1rgx-a2-m1-cB 89 89 0.9468 1.0000 1.0000 2.69e-61 1rgx-a2-m1-cB_1rgx-a2-m2-cC
5 1rgx-a2-m1-cA 89 89 0.9468 1.0000 1.0000 2.69e-61 1rgx-a2-m1-cA_1rgx-a2-m2-cC
6 1rfx-a3-m4-cA 89 89 0.9468 1.0000 1.0000 2.69e-61 1rfx-a3-m1-cB_1rfx-a3-m4-cA
7 1rfx-a3-m2-cC 89 89 0.9468 1.0000 1.0000 2.69e-61 1rfx-a3-m1-cB_1rfx-a3-m2-cC, 1rfx-a3-m2-cB_1rfx-a3-m2-cC
8 1rfx-a3-m2-cB 89 89 0.9468 1.0000 1.0000 2.69e-61 1rfx-a3-m1-cB_1rfx-a3-m2-cB, 1rfx-a3-m2-cB_1rfx-a3-m2-cC
9 1rfx-a3-m1-cB 89 89 0.9468 1.0000 1.0000 2.69e-61 1rfx-a3-m1-cB_1rfx-a3-m2-cB, 1rfx-a3-m1-cB_1rfx-a3-m2-cC, 1rfx-a3-m1-cB_1rfx-a3-m4-cA
10 1rh7-a3-m1-cC 81 85 0.4043 0.4691 0.4471 1.95e-23 1rh7-a3-m1-cB_1rh7-a3-m1-cC
11 1rh7-a3-m1-cB 81 85 0.4043 0.4691 0.4471 1.95e-23 1rh7-a3-m1-cB_1rh7-a3-m1-cC
12 3bes-a2-m2-cR 250 76 0.1915 0.0720 0.2368 5.5 3bes-a2-m1-cR_3bes-a2-m2-cR
13 3bes-a2-m1-cR 250 76 0.1915 0.0720 0.2368 5.5 3bes-a2-m1-cR_3bes-a2-m2-cR
14 3bes-a1-m4-cR 250 76 0.1915 0.0720 0.2368 5.5 3bes-a1-m1-cR_3bes-a1-m4-cR, 3bes-a1-m2-cR_3bes-a1-m4-cR
15 3bes-a1-m2-cR 250 76 0.1915 0.0720 0.2368 5.5 3bes-a1-m2-cR_3bes-a1-m4-cR
16 3bes-a1-m1-cR 250 76 0.1915 0.0720 0.2368 5.5 3bes-a1-m1-cR_3bes-a1-m4-cR
17 7tym-a1-m1-cB 771 43 0.1383 0.0169 0.3023 7.7 7tym-a1-m1-cA_7tym-a1-m1-cB
18 7tym-a1-m1-cA 771 43 0.1383 0.0169 0.3023 7.7 7tym-a1-m1-cA_7tym-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600