Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=69)
SSQKEQDVLTPRECLILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAV
LIAKSDGVL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2krf-a1-m1-cB 69 69 1.0000 1.0000 1.0000 1.12e-45 2krf-a1-m1-cA_2krf-a1-m1-cB
2 2krf-a1-m1-cA 69 69 1.0000 1.0000 1.0000 1.12e-45 2krf-a1-m1-cA_2krf-a1-m1-cB
3 4zms-a1-m1-cB 200 61 0.4203 0.1450 0.4754 5.65e-12 4zms-a1-m1-cB_4zms-a1-m1-cA
4 4zms-a1-m1-cA 207 61 0.4203 0.1401 0.4754 6.08e-12 4zms-a1-m1-cB_4zms-a1-m1-cA
5 4if4-a3-m1-cC 208 57 0.3478 0.1154 0.4211 3.73e-09 4if4-a3-m1-cB_4if4-a3-m1-cC
6 4if4-a3-m1-cB 208 57 0.3478 0.1154 0.4211 3.73e-09 4if4-a3-m1-cB_4if4-a3-m1-cC
7 4if4-a1-m1-cD 208 57 0.3478 0.1154 0.4211 3.73e-09 4if4-a1-m1-cB_4if4-a1-m1-cD
8 4if4-a1-m1-cB 208 57 0.3478 0.1154 0.4211 3.73e-09 4if4-a1-m1-cA_4if4-a1-m1-cB, 4if4-a1-m1-cB_4if4-a1-m1-cD
9 4if4-a1-m1-cA 208 57 0.3478 0.1154 0.4211 3.73e-09 4if4-a1-m1-cA_4if4-a1-m1-cB
10 7x1k-a1-m1-cB 68 60 0.3188 0.3235 0.3667 9.24e-09 7x1k-a1-m1-cB_7x1k-a1-m1-cA
11 7x1k-a1-m1-cA 69 60 0.3188 0.3188 0.3667 9.87e-09 7x1k-a1-m1-cB_7x1k-a1-m1-cA
12 4wuh-a1-m1-cB 68 60 0.3333 0.3382 0.3833 5.01e-08 4wuh-a1-m1-cA_4wuh-a1-m1-cB
13 4wuh-a1-m1-cA 68 60 0.3333 0.3382 0.3833 5.01e-08 4wuh-a1-m1-cA_4wuh-a1-m1-cB
14 3klo-a1-m1-cA 217 58 0.3043 0.0968 0.3621 5.31e-06 3klo-a1-m2-cB_3klo-a1-m1-cA
15 3klo-a1-m2-cB 216 58 0.3043 0.0972 0.3621 5.50e-06 3klo-a1-m2-cB_3klo-a1-m1-cA
16 5hev-a2-m1-cB 209 61 0.3333 0.1100 0.3770 1.02e-05 5hev-a2-m1-cB_5hev-a2-m1-cC
17 5hev-a2-m1-cC 210 61 0.3333 0.1095 0.3770 1.08e-05 5hev-a2-m1-cB_5hev-a2-m1-cC
18 7dwm-a1-m1-cB 218 59 0.3333 0.1055 0.3898 1.30e-05 7dwm-a1-m1-cA_7dwm-a1-m1-cB
19 7dwm-a1-m1-cA 218 59 0.3333 0.1055 0.3898 1.68e-05 7dwm-a1-m1-cA_7dwm-a1-m1-cB
20 3clo-a2-m2-cC 248 63 0.3043 0.0847 0.3333 6.10e-05 3clo-a2-m1-cC_3clo-a2-m2-cC
21 3clo-a2-m1-cC 248 63 0.3043 0.0847 0.3333 6.10e-05 3clo-a2-m1-cC_3clo-a2-m2-cC
22 3c3w-a1-m1-cB 210 55 0.2464 0.0810 0.3091 6.57e-04 3c3w-a1-m1-cB_3c3w-a1-m1-cA
23 3c3w-a1-m1-cA 211 55 0.2464 0.0806 0.3091 6.58e-04 3c3w-a1-m1-cB_3c3w-a1-m1-cA
24 6cc0-a1-m1-cB 233 61 0.2754 0.0815 0.3115 0.002 6cc0-a1-m1-cB_6cc0-a1-m1-cA
25 6cc0-a1-m1-cA 234 61 0.2754 0.0812 0.3115 0.002 6cc0-a1-m1-cB_6cc0-a1-m1-cA
26 3c57-a1-m1-cA 51 50 0.2174 0.2941 0.3000 0.002 3c57-a1-m1-cB_3c57-a1-m1-cA
27 2q0o-a1-m1-cB 235 64 0.2899 0.0851 0.3125 0.005 2q0o-a1-m1-cA_2q0o-a1-m1-cB
28 2q0o-a1-m1-cA 235 64 0.2899 0.0851 0.3125 0.005 2q0o-a1-m1-cA_2q0o-a1-m1-cB
29 7r3g-a1-m1-cB 236 58 0.2754 0.0805 0.3276 0.008 7r3g-a1-m1-cA_7r3g-a1-m1-cB
30 7r3g-a1-m1-cA 236 58 0.2754 0.0805 0.3276 0.008 7r3g-a1-m1-cA_7r3g-a1-m1-cB
31 3c57-a1-m1-cB 49 49 0.2029 0.2857 0.2857 0.009 3c57-a1-m1-cB_3c57-a1-m1-cA
32 4ldz-a1-m1-cA 196 60 0.2899 0.1020 0.3333 0.019 4ldz-a1-m1-cB_4ldz-a1-m1-cA
33 4ua1-a1-m1-cA 124 46 0.2609 0.1452 0.3913 0.046 4ua1-a1-m1-cA_4ua1-a1-m1-cB
34 4y15-a2-m2-cB 237 71 0.2754 0.0802 0.2676 0.046 4y15-a2-m1-cB_4y15-a2-m2-cB
35 4y15-a2-m1-cB 237 71 0.2754 0.0802 0.2676 0.046 4y15-a2-m1-cB_4y15-a2-m2-cB
36 4ua1-a1-m1-cB 125 47 0.2754 0.1520 0.4043 0.080 4ua1-a1-m1-cA_4ua1-a1-m1-cB
37 2d1h-a1-m1-cA 98 34 0.2029 0.1429 0.4118 0.093 2d1h-a1-m1-cB_2d1h-a1-m1-cA
38 2d1h-a1-m1-cB 96 34 0.2029 0.1458 0.4118 0.095 2d1h-a1-m1-cB_2d1h-a1-m1-cA
39 1zlj-a4-m1-cH 64 55 0.2464 0.2656 0.3091 1.0 1zlj-a4-m1-cH_1zlj-a4-m1-cG
40 1zlj-a4-m1-cG 67 55 0.2464 0.2537 0.3091 1.4 1zlj-a4-m1-cH_1zlj-a4-m1-cG
41 6zj2-a3-m1-cL 166 45 0.2319 0.0964 0.3556 3.6 6zj2-a3-m1-cL_6zj2-a3-m1-cM
42 1mus-a1-m2-cA 458 22 0.1594 0.0240 0.5000 3.7 1mus-a1-m1-cA_1mus-a1-m2-cA
43 1mus-a1-m1-cA 458 22 0.1594 0.0240 0.5000 3.7 1mus-a1-m1-cA_1mus-a1-m2-cA
44 6zj2-a3-m1-cM 179 45 0.2319 0.0894 0.3556 4.2 6zj2-a3-m1-cL_6zj2-a3-m1-cM
45 8b4a-a1-m1-cD 239 49 0.2174 0.0628 0.3061 4.3 8b4a-a1-m1-cD_8b4a-a1-m1-cC
46 8b4a-a1-m1-cC 241 49 0.2174 0.0622 0.3061 4.3 8b4a-a1-m1-cD_8b4a-a1-m1-cC
47 4e2l-a1-m1-cB 240 24 0.1594 0.0458 0.4583 5.6 4e2l-a1-m1-cA_4e2l-a1-m1-cB
48 4e2l-a1-m1-cA 240 24 0.1594 0.0458 0.4583 5.6 4e2l-a1-m1-cA_4e2l-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600