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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
SSQQVWKLVIITEEILLKKVSKIIKEAGASGYTVLAAAGEGSRNVRSTGEPSVSHAYSNI
KFEVLTASRELADQIQDKVVAKYFDDYSCITYISTVEAL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6mm2-a1-m3-cA 99 99 1.0000 1.0000 1.0000 4.00e-68 6mm2-a1-m2-cA_6mm2-a1-m3-cA
2 6mm2-a1-m2-cA 99 99 1.0000 1.0000 1.0000 4.00e-68 6mm2-a1-m2-cA_6mm2-a1-m3-cA
3 7r31-a1-m1-cA 99 93 0.5556 0.5556 0.5914 2.82e-37 7r31-a1-m1-cA_7r31-a1-m1-cB
4 7r31-a1-m1-cB 100 93 0.5556 0.5500 0.5914 3.54e-37 7r31-a1-m1-cA_7r31-a1-m1-cB
5 7egl-a1-m3-cB 93 93 0.4646 0.4946 0.4946 1.89e-25 7egl-a1-m2-cB_7egl-a1-m3-cB
6 7egl-a1-m2-cB 93 93 0.4646 0.4946 0.4946 1.89e-25 7egl-a1-m2-cB_7egl-a1-m3-cB
7 6wue-a1-m1-cB 87 93 0.4545 0.5172 0.4839 3.22e-23 6wue-a1-m1-cB_6wue-a1-m2-cA
8 6wue-a1-m2-cA 90 93 0.4444 0.4889 0.4731 6.52e-23 6wue-a1-m1-cB_6wue-a1-m2-cA
9 3dfe-a2-m1-cB 81 98 0.4747 0.5802 0.4796 1.29e-21 3dfe-a2-m1-cA_3dfe-a2-m1-cB
10 3dfe-a2-m1-cA 81 98 0.4747 0.5802 0.4796 1.29e-21 3dfe-a2-m1-cA_3dfe-a2-m1-cB
11 2cz4-a2-m2-cC 91 91 0.3131 0.3407 0.3407 2.68e-08 2cz4-a2-m2-cC_2cz4-a2-m1-cB, 2cz4-a2-m2-cC_2cz4-a2-m2-cB
12 2cz4-a2-m2-cB 92 91 0.3030 0.3261 0.3297 5.65e-07 2cz4-a2-m2-cC_2cz4-a2-m2-cB
13 2cz4-a2-m1-cB 92 91 0.3030 0.3261 0.3297 5.65e-07 2cz4-a2-m2-cC_2cz4-a2-m1-cB
14 7o4x-a1-m3-cA 103 29 0.1111 0.1068 0.3793 0.55 7o4x-a1-m2-cA_7o4x-a1-m3-cA
15 7o4x-a1-m2-cA 103 29 0.1111 0.1068 0.3793 0.55 7o4x-a1-m2-cA_7o4x-a1-m3-cA
16 1hv8-a1-m1-cB 353 50 0.1717 0.0482 0.3400 3.9 1hv8-a1-m1-cA_1hv8-a1-m1-cB
17 1hv8-a1-m1-cA 353 50 0.1717 0.0482 0.3400 3.9 1hv8-a1-m1-cA_1hv8-a1-m1-cB
18 5xkt-a1-m1-cB 199 26 0.0909 0.0452 0.3462 4.9 5xkt-a1-m1-cA_5xkt-a1-m1-cB
19 5xkt-a1-m1-cA 199 26 0.0909 0.0452 0.3462 4.9 5xkt-a1-m1-cA_5xkt-a1-m1-cB
20 4fip-a1-m1-cE 441 25 0.1010 0.0227 0.4000 8.4 4fip-a1-m1-cE_4fip-a1-m1-cA
21 4fip-a1-m1-cA 450 25 0.1010 0.0222 0.4000 8.4 4fip-a1-m1-cE_4fip-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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