Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
SSSFFPDFGLLLYLEELNKEELNTFKLFLKETMEPEHGLTPWNEVKKARREDLANLMKKY
YPGEKAWSVSLKIFGKMNLKVLCERAKE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4n1k-a3-m1-cA 88 88 1.0000 1.0000 1.0000 5.18e-60 4n1k-a3-m1-cA_4n1k-a3-m2-cD, 4n1k-a3-m2-cC_4n1k-a3-m1-cA
2 4n1k-a3-m2-cD 94 88 1.0000 0.9362 1.0000 6.58e-60 4n1k-a3-m1-cA_4n1k-a3-m2-cD
3 4n1k-a3-m2-cC 86 86 0.9773 1.0000 1.0000 1.58e-58 4n1k-a3-m2-cC_4n1k-a3-m1-cA
4 4n1j-a3-m2-cD 91 88 0.9545 0.9231 0.9545 1.45e-50 4n1j-a3-m2-cC_4n1j-a3-m2-cD
5 4n1j-a3-m2-cC 86 86 0.9318 0.9535 0.9535 3.01e-49 4n1j-a3-m2-cC_4n1j-a3-m2-cD
6 4ewi-a3-m2-cB 90 81 0.5114 0.5000 0.5556 7.18e-25 4ewi-a3-m2-cB_4ewi-a3-m1-cA, 4ewi-a3-m2-cB_4ewi-a3-m2-cA
7 4ewi-a3-m2-cA 91 81 0.5114 0.4945 0.5556 8.88e-25 4ewi-a3-m1-cA_4ewi-a3-m2-cA, 4ewi-a3-m2-cB_4ewi-a3-m2-cA
8 4ewi-a3-m1-cA 91 81 0.5114 0.4945 0.5556 8.88e-25 4ewi-a3-m1-cA_4ewi-a3-m2-cA, 4ewi-a3-m2-cB_4ewi-a3-m1-cA
9 7k3r-a1-m1-cU 95 86 0.2841 0.2632 0.2907 0.001 7k3r-a1-m1-cG_7k3r-a1-m1-cU, 7k3r-a1-m1-cM_7k3r-a1-m1-cU, 7k3r-a1-m1-cO_7k3r-a1-m1-cU
10 7k3r-a1-m1-cO 95 86 0.2841 0.2632 0.2907 0.001 7k3r-a1-m1-cO_7k3r-a1-m1-cU
11 7k3r-a1-m1-cM 95 86 0.2841 0.2632 0.2907 0.001 7k3r-a1-m1-cM_7k3r-a1-m1-cU
12 7k3r-a1-m1-cG 95 86 0.2841 0.2632 0.2907 0.001 7k3r-a1-m1-cG_7k3r-a1-m1-cU
13 4cbb-a2-m1-cD 489 38 0.1364 0.0245 0.3158 3.2 4cbb-a2-m1-cA_4cbb-a2-m1-cD, 4cbb-a2-m1-cB_4cbb-a2-m1-cD, 4cbb-a2-m1-cC_4cbb-a2-m1-cD
14 4cbb-a2-m1-cC 489 38 0.1364 0.0245 0.3158 3.2 4cbb-a2-m1-cC_4cbb-a2-m1-cD
15 4cbb-a2-m1-cB 489 38 0.1364 0.0245 0.3158 3.2 4cbb-a2-m1-cB_4cbb-a2-m1-cD
16 4cbb-a2-m1-cA 489 38 0.1364 0.0245 0.3158 3.2 4cbb-a2-m1-cA_4cbb-a2-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600