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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
SSSFFPDFGLLLYLEELNKEELNTFKLFLKETMEPEHGLTPWNEVKKARREDLANLMKKY
YPGEKAWSVSLKIFGKMNLKVLCERAKEEINWSA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4n1k-a3-m2-cD 94 94 1.0000 1.0000 1.0000 1.04e-64 4n1k-a3-m1-cA_4n1k-a3-m2-cD
2 4n1k-a3-m1-cA 88 88 0.9362 1.0000 1.0000 7.03e-60 4n1k-a3-m1-cA_4n1k-a3-m2-cD, 4n1k-a3-m2-cC_4n1k-a3-m1-cA
3 4n1k-a3-m2-cC 86 86 0.9149 1.0000 1.0000 2.15e-58 4n1k-a3-m2-cC_4n1k-a3-m1-cA
4 4n1j-a3-m2-cD 91 94 0.9574 0.9890 0.9574 2.21e-55 4n1j-a3-m2-cC_4n1j-a3-m2-cD
5 4n1j-a3-m2-cC 86 89 0.9043 0.9884 0.9551 2.73e-51 4n1j-a3-m2-cC_4n1j-a3-m2-cD
6 4ewi-a3-m2-cB 90 87 0.4894 0.5111 0.5287 1.15e-24 4ewi-a3-m2-cB_4ewi-a3-m1-cA, 4ewi-a3-m2-cB_4ewi-a3-m2-cA
7 4ewi-a3-m2-cA 91 87 0.4894 0.5055 0.5287 1.30e-24 4ewi-a3-m1-cA_4ewi-a3-m2-cA, 4ewi-a3-m2-cB_4ewi-a3-m2-cA
8 4ewi-a3-m1-cA 91 87 0.4894 0.5055 0.5287 1.30e-24 4ewi-a3-m1-cA_4ewi-a3-m2-cA, 4ewi-a3-m2-cB_4ewi-a3-m1-cA
9 7k3r-a1-m1-cU 95 87 0.2766 0.2737 0.2989 4.02e-04 7k3r-a1-m1-cG_7k3r-a1-m1-cU, 7k3r-a1-m1-cM_7k3r-a1-m1-cU, 7k3r-a1-m1-cO_7k3r-a1-m1-cU
10 7k3r-a1-m1-cO 95 87 0.2766 0.2737 0.2989 4.02e-04 7k3r-a1-m1-cO_7k3r-a1-m1-cU
11 7k3r-a1-m1-cM 95 87 0.2766 0.2737 0.2989 4.02e-04 7k3r-a1-m1-cM_7k3r-a1-m1-cU
12 7k3r-a1-m1-cG 95 87 0.2766 0.2737 0.2989 4.02e-04 7k3r-a1-m1-cG_7k3r-a1-m1-cU
13 4cbb-a2-m1-cD 489 38 0.1277 0.0245 0.3158 3.8 4cbb-a2-m1-cA_4cbb-a2-m1-cD, 4cbb-a2-m1-cB_4cbb-a2-m1-cD, 4cbb-a2-m1-cC_4cbb-a2-m1-cD
14 4cbb-a2-m1-cC 489 38 0.1277 0.0245 0.3158 3.8 4cbb-a2-m1-cC_4cbb-a2-m1-cD
15 4cbb-a2-m1-cB 489 38 0.1277 0.0245 0.3158 3.8 4cbb-a2-m1-cB_4cbb-a2-m1-cD
16 4cbb-a2-m1-cA 489 38 0.1277 0.0245 0.3158 3.8 4cbb-a2-m1-cA_4cbb-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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