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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
SSVDVLLTVGKLDASLALLTTQDHHVIEFPTVLLPENVKAGSIIKMQVSQNLEEEKKQRN
HFKSIQAKILEKYGT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4in3-a1-m1-cC 75 75 1.0000 1.0000 1.0000 3.71e-50 4in3-a1-m1-cC_4in3-a1-m1-cA
2 4in3-a1-m1-cA 80 75 1.0000 0.9375 1.0000 5.28e-50 4in3-a1-m1-cC_4in3-a1-m1-cA
3 4wjw-a1-m2-cA 68 73 0.8933 0.9853 0.9178 4.07e-40 4wjw-a1-m1-cA_4wjw-a1-m2-cA
4 4wjw-a1-m1-cA 68 73 0.8933 0.9853 0.9178 4.07e-40 4wjw-a1-m1-cA_4wjw-a1-m2-cA
5 4yg8-a2-m6-cA 276 27 0.3600 0.0978 1.0000 5.48e-12 4yg8-a2-m3-cA_4yg8-a2-m6-cA
6 4yg8-a2-m3-cA 276 27 0.3600 0.0978 1.0000 5.48e-12 4yg8-a2-m3-cA_4yg8-a2-m6-cA
7 1yg2-a1-m2-cA 169 40 0.1467 0.0651 0.2750 2.7 1yg2-a1-m1-cA_1yg2-a1-m2-cA
8 1yg2-a1-m1-cA 169 40 0.1467 0.0651 0.2750 2.7 1yg2-a1-m1-cA_1yg2-a1-m2-cA
9 7n7l-a1-m2-cA 297 37 0.1600 0.0404 0.3243 2.9 7n7l-a1-m1-cA_7n7l-a1-m2-cA
10 7n7l-a1-m1-cA 297 37 0.1600 0.0404 0.3243 2.9 7n7l-a1-m1-cA_7n7l-a1-m2-cA
11 4r0c-a1-m1-cB 468 22 0.1467 0.0235 0.5000 3.4 4r0c-a1-m1-cB_4r0c-a1-m1-cC
12 4r0c-a1-m1-cC 474 22 0.1467 0.0232 0.5000 3.4 4r0c-a1-m1-cB_4r0c-a1-m1-cC, 4r0c-a1-m1-cC_4r0c-a1-m1-cD
13 4r0c-a1-m1-cD 483 22 0.1467 0.0228 0.5000 3.4 4r0c-a1-m1-cC_4r0c-a1-m1-cD
14 8bq4-a1-m1-cB 290 34 0.1733 0.0448 0.3824 3.6 8bq4-a1-m1-cA_8bq4-a1-m1-cB
15 8bq4-a1-m1-cA 285 34 0.1733 0.0456 0.3824 3.7 8bq4-a1-m1-cA_8bq4-a1-m1-cB
16 2gk9-a2-m1-cB 250 34 0.1733 0.0520 0.3824 5.3 2gk9-a2-m1-cC_2gk9-a2-m1-cB
17 2gk9-a2-m1-cC 245 34 0.1733 0.0531 0.3824 5.4 2gk9-a2-m1-cC_2gk9-a2-m1-cB
18 1j5x-a2-m2-cA 312 34 0.1733 0.0417 0.3824 7.0 1j5x-a2-m1-cA_1j5x-a2-m2-cA
19 1j5x-a2-m1-cA 312 34 0.1733 0.0417 0.3824 7.0 1j5x-a2-m1-cA_1j5x-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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