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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
SSVPTKLEVVAATPTSLLISWDAPAVTVDHYVITYGETGAYWSYQEFTVPGSKSTATISG
LKPGVDYTITVYANPYSDAPIYYSYHSPISINYRT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6bqo-a2-m2-cC 95 95 1.0000 1.0000 1.0000 1.77e-63 6bqo-a2-m1-cC_6bqo-a2-m2-cC
2 6bqo-a2-m1-cC 95 95 1.0000 1.0000 1.0000 1.77e-63 6bqo-a2-m1-cC_6bqo-a2-m2-cC
3 2ck2-a1-m1-cB 96 96 0.6000 0.5938 0.5938 1.73e-30 2ck2-a1-m1-cA_2ck2-a1-m1-cB
4 2ck2-a1-m1-cA 94 99 0.6000 0.6064 0.5758 3.07e-29 2ck2-a1-m1-cA_2ck2-a1-m1-cB
5 4lpu-a1-m1-cB 93 93 0.3368 0.3441 0.3441 1.80e-11 4lpu-a1-m1-cA_4lpu-a1-m1-cB
6 4lpu-a1-m1-cA 93 93 0.3368 0.3441 0.3441 1.80e-11 4lpu-a1-m1-cA_4lpu-a1-m1-cB
7 5j7k-a2-m1-cB 90 72 0.3158 0.3333 0.4167 1.47e-06 5j7k-a2-m1-cF_5j7k-a2-m1-cB
8 5j7k-a1-m1-cA 84 70 0.3053 0.3452 0.4143 4.66e-06 5j7k-a1-m1-cC_5j7k-a1-m1-cA
9 5j7k-a2-m1-cF 79 70 0.3053 0.3671 0.4143 5.94e-06 5j7k-a2-m1-cF_5j7k-a2-m1-cB
10 5j7k-a2-m1-cG 85 70 0.2947 0.3294 0.4000 4.74e-05 5j7k-a2-m1-cD_5j7k-a2-m1-cG
11 5j7k-a1-m1-cC 78 69 0.2842 0.3462 0.3913 1.54e-04 5j7k-a1-m1-cC_5j7k-a1-m1-cA
12 3b83-a1-m8-cG 99 70 0.1579 0.1515 0.2143 0.089 3b83-a1-m2-cA_3b83-a1-m8-cG, 3b83-a1-m2-cE_3b83-a1-m8-cG
13 3b83-a1-m4-cE 99 70 0.1579 0.1515 0.2143 0.089 3b83-a1-m1-cC_3b83-a1-m4-cE, 3b83-a1-m4-cC_3b83-a1-m4-cE, 3b83-a1-m4-cF_3b83-a1-m4-cE
14 3b83-a1-m4-cC 99 70 0.1579 0.1515 0.2143 0.089 3b83-a1-m4-cC_3b83-a1-m4-cE
15 3b83-a1-m2-cE 99 70 0.1579 0.1515 0.2143 0.089 3b83-a1-m2-cE_3b83-a1-m8-cG
16 3b83-a1-m1-cC 99 70 0.1579 0.1515 0.2143 0.089 3b83-a1-m1-cC_3b83-a1-m4-cE
17 3b83-a1-m2-cA 95 70 0.1579 0.1579 0.2143 0.090 3b83-a1-m2-cA_3b83-a1-m8-cG, 3b83-a1-m8-cB_3b83-a1-m2-cA
18 3b83-a5-m1-cD 91 70 0.1579 0.1648 0.2143 0.092 3b83-a5-m1-cD_3b83-a5-m1-cH
19 3b83-a1-m8-cD 91 70 0.1579 0.1648 0.2143 0.092 3b83-a1-m8-cD_3b83-a1-m8-cB
20 3b83-a1-m5-cD 91 70 0.1579 0.1648 0.2143 0.092 3b83-a1-m5-cD_3b83-a1-m8-cH
21 3b83-a1-m8-cB 92 70 0.1579 0.1630 0.2143 0.096 3b83-a1-m8-cB_3b83-a1-m2-cA, 3b83-a1-m8-cD_3b83-a1-m8-cB
22 3b83-a1-m4-cF 92 70 0.1579 0.1630 0.2143 0.096 3b83-a1-m4-cF_3b83-a1-m4-cE
23 3b83-a5-m1-cH 94 70 0.1579 0.1596 0.2143 0.10 3b83-a5-m1-cD_3b83-a5-m1-cH
24 3b83-a1-m8-cH 94 70 0.1579 0.1596 0.2143 0.10 3b83-a1-m5-cD_3b83-a1-m8-cH
25 3t1w-a1-m2-cA 368 69 0.1474 0.0380 0.2029 0.15 3t1w-a1-m1-cA_3t1w-a1-m2-cA
26 3t1w-a1-m2-cA 368 75 0.2421 0.0625 0.3067 0.18 3t1w-a1-m1-cA_3t1w-a1-m2-cA
27 3t1w-a1-m2-cA 368 68 0.2421 0.0625 0.3382 2.5 3t1w-a1-m1-cA_3t1w-a1-m2-cA
28 3t1w-a1-m1-cA 368 69 0.1474 0.0380 0.2029 0.15 3t1w-a1-m1-cA_3t1w-a1-m2-cA
29 3t1w-a1-m1-cA 368 75 0.2421 0.0625 0.3067 0.18 3t1w-a1-m1-cA_3t1w-a1-m2-cA
30 3t1w-a1-m1-cA 368 68 0.2421 0.0625 0.3382 2.5 3t1w-a1-m1-cA_3t1w-a1-m2-cA
31 2rbl-a1-m1-cB 89 71 0.1684 0.1798 0.2254 0.20 2rbl-a1-m1-cA_2rbl-a1-m1-cB
32 2rbl-a1-m1-cA 89 71 0.1684 0.1798 0.2254 0.20 2rbl-a1-m1-cA_2rbl-a1-m1-cB
33 5fn8-a2-m3-cA 178 67 0.1579 0.0843 0.2239 0.58 5fn8-a2-m1-cA_5fn8-a2-m3-cA
34 5fn8-a2-m1-cA 178 67 0.1579 0.0843 0.2239 0.58 5fn8-a2-m1-cA_5fn8-a2-m3-cA
35 7y8s-a1-m1-cA 275 71 0.2000 0.0691 0.2676 1.4 7y8s-a1-m1-cA_7y8s-a1-m1-cB
36 8d7h-a1-m1-cE 303 25 0.0947 0.0297 0.3600 1.5 8d7h-a1-m1-cA_8d7h-a1-m1-cE
37 8d7h-a1-m1-cA 303 25 0.0947 0.0297 0.3600 1.5 8d7h-a1-m1-cA_8d7h-a1-m1-cE
38 7uhz-a1-m1-cN 111 97 0.2421 0.2072 0.2371 1.6 7uhz-a1-m1-cL_7uhz-a1-m1-cN
39 7uhz-a1-m1-cL 111 97 0.2421 0.2072 0.2371 1.6 7uhz-a1-m1-cL_7uhz-a1-m1-cN
40 3dgg-a3-m1-cA 217 32 0.1263 0.0553 0.3750 1.7 3dgg-a3-m1-cC_3dgg-a3-m1-cA
41 3dgg-a3-m1-cC 215 32 0.1263 0.0558 0.3750 1.7 3dgg-a3-m1-cC_3dgg-a3-m1-cA
42 7y8s-a1-m1-cB 288 73 0.2000 0.0660 0.2603 3.1 7y8s-a1-m1-cA_7y8s-a1-m1-cB
43 2hrp-a3-m1-cM 218 93 0.2316 0.1009 0.2366 6.4 2hrp-a3-m1-cM_2hrp-a3-m1-cL
44 2hrp-a3-m1-cL 215 93 0.2316 0.1023 0.2366 6.7 2hrp-a3-m1-cM_2hrp-a3-m1-cL
45 1d5b-a1-m1-cL 211 31 0.1158 0.0521 0.3548 8.9 1d5b-a1-m1-cA_1d5b-a1-m1-cL
46 1d5b-a1-m1-cA 211 31 0.1158 0.0521 0.3548 8.9 1d5b-a1-m1-cA_1d5b-a1-m1-cL

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Reference:
Jacob Schwartz et al.

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