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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
STCTKVLYFTDRSLTPFMVNIPKRLGEVTLKDFKAAIDREGNHRYHFKALDPEFGTVKEE
VFHDDDAIPGWEGKIVAWVEED

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5y3b-a1-m1-cG 82 82 1.0000 1.0000 1.0000 8.24e-58 5y3b-a1-m1-cD_5y3b-a1-m1-cG
2 5y3b-a1-m1-cA 82 82 1.0000 1.0000 1.0000 8.24e-58 5y3b-a1-m1-cB_5y3b-a1-m1-cA
3 5y3b-a1-m1-cD 81 81 0.9878 1.0000 1.0000 6.03e-57 5y3b-a1-m1-cD_5y3b-a1-m1-cG
4 5y3b-a1-m1-cB 81 81 0.9878 1.0000 1.0000 6.03e-57 5y3b-a1-m1-cB_5y3b-a1-m1-cA
5 1wsp-a1-m1-cA 83 56 0.2927 0.2892 0.4286 9.54e-08 1wsp-a1-m1-cA_1wsp-a1-m1-cB
6 1wsp-a1-m1-cC 84 56 0.2927 0.2857 0.4286 1.06e-07 1wsp-a1-m1-cB_1wsp-a1-m1-cC
7 1wsp-a1-m1-cB 84 56 0.2927 0.2857 0.4286 1.06e-07 1wsp-a1-m1-cA_1wsp-a1-m1-cB, 1wsp-a1-m1-cB_1wsp-a1-m1-cC
8 7x4t-a2-m1-cA 298 78 0.2683 0.0738 0.2821 3.1 7x4t-a2-m1-cB_7x4t-a2-m1-cA
9 7nf8-a1-m2-cA 623 63 0.2317 0.0305 0.3016 3.5 7nf8-a1-m1-cA_7nf8-a1-m2-cA
10 7nf8-a1-m1-cA 623 63 0.2317 0.0305 0.3016 3.5 7nf8-a1-m1-cA_7nf8-a1-m2-cA
11 1rco-a1-m1-cV 467 44 0.1463 0.0257 0.2727 6.6 1rco-a1-m1-cL_1rco-a1-m1-cV, 1rco-a1-m1-cR_1rco-a1-m1-cV
12 1rco-a1-m1-cR 467 44 0.1463 0.0257 0.2727 6.6 1rco-a1-m1-cR_1rco-a1-m1-cV
13 1rco-a1-m1-cL 467 44 0.1463 0.0257 0.2727 6.6 1rco-a1-m1-cL_1rco-a1-m1-cV
14 1gk8-a1-m1-cC 464 44 0.1463 0.0259 0.2727 7.1 1gk8-a1-m2-cG_1gk8-a1-m1-cC
15 1gk8-a1-m1-cA 464 44 0.1463 0.0259 0.2727 7.1 1gk8-a1-m2-cG_1gk8-a1-m1-cA
16 1gk8-a1-m2-cE 460 44 0.1463 0.0261 0.2727 7.2 1gk8-a1-m2-cE_1gk8-a1-m2-cG
17 4k7z-a1-m2-cA 467 45 0.1829 0.0321 0.3333 7.2 4k7z-a1-m1-cA_4k7z-a1-m2-cA
18 4k7z-a1-m1-cA 467 45 0.1829 0.0321 0.3333 7.2 4k7z-a1-m1-cA_4k7z-a1-m2-cA
19 1gk8-a1-m2-cG 462 44 0.1463 0.0260 0.2727 7.3 1gk8-a1-m2-cE_1gk8-a1-m2-cG, 1gk8-a1-m2-cG_1gk8-a1-m1-cA, 1gk8-a1-m2-cG_1gk8-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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