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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
STDVALSWLAALPATLGQVKDLEITSFKYDGQRGEVRIHARSSDFQPFEQARVKLAEKFN
VEQGQLNRSNVVGSFVLKRQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2w7v-a2-m3-cB 80 80 1.0000 1.0000 1.0000 6.40e-55 2w7v-a2-m1-cB_2w7v-a2-m3-cB
2 2w7v-a2-m1-cB 80 80 1.0000 1.0000 1.0000 6.40e-55 2w7v-a2-m1-cB_2w7v-a2-m3-cB
3 5a9s-a1-m1-cB 282 41 0.1375 0.0390 0.2683 6.2 5a9s-a1-m1-cA_5a9s-a1-m1-cB
4 5sum-a3-m1-cA 391 55 0.2000 0.0409 0.2909 7.7 5sum-a3-m1-cA_5sum-a3-m2-cB
5 1a8l-a2-m3-cA 226 42 0.1375 0.0487 0.2619 7.9 1a8l-a2-m1-cA_1a8l-a2-m3-cA
6 1a8l-a2-m1-cA 226 42 0.1375 0.0487 0.2619 7.9 1a8l-a2-m1-cA_1a8l-a2-m3-cA
7 1a8l-a1-m2-cA 226 42 0.1375 0.0487 0.2619 7.9 1a8l-a1-m1-cA_1a8l-a1-m2-cA
8 1a8l-a1-m1-cA 226 42 0.1375 0.0487 0.2619 7.9 1a8l-a1-m1-cA_1a8l-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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