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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
STFEEMALTTFMITKESYSKLKNSVSDVAFNRYLSLYNKYRYFSGKMDTAAYREAACSQL
AKAMETFNHNNGNDVLYQPPTASVTTSFL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3vcb-a1-m1-cB 89 89 1.0000 1.0000 1.0000 1.71e-62 3vcb-a1-m1-cA_3vcb-a1-m1-cB
2 3vcb-a1-m1-cA 89 89 1.0000 1.0000 1.0000 1.71e-62 3vcb-a1-m1-cA_3vcb-a1-m1-cB
3 3vc8-a1-m1-cB 85 85 0.9438 0.9882 0.9882 5.46e-59 3vc8-a1-m1-cA_3vc8-a1-m1-cB
4 3vc8-a1-m1-cA 81 81 0.8989 0.9877 0.9877 3.19e-56 3vc8-a1-m1-cA_3vc8-a1-m1-cB
5 3gzf-a1-m1-cA 96 88 0.3933 0.3646 0.3977 1.91e-14 3gzf-a1-m1-cC_3gzf-a1-m1-cA
6 3gzf-a1-m1-cC 92 84 0.3933 0.3804 0.4167 2.74e-14 3gzf-a1-m1-cC_3gzf-a1-m1-cA
7 7t63-a1-m1-cA 325 41 0.1348 0.0369 0.2927 2.8 7t63-a1-m1-cA_7t63-a1-m1-cB
8 7t63-a1-m1-cB 334 41 0.1348 0.0359 0.2927 2.9 7t63-a1-m1-cA_7t63-a1-m1-cB
9 2j2f-a3-m1-cE 347 18 0.1124 0.0288 0.5556 4.3 2j2f-a3-m1-cD_2j2f-a3-m1-cE
10 2j2f-a3-m1-cD 347 18 0.1124 0.0288 0.5556 4.3 2j2f-a3-m1-cD_2j2f-a3-m1-cE
11 2uw1-a1-m1-cB 338 18 0.1124 0.0296 0.5556 5.7 2uw1-a1-m1-cA_2uw1-a1-m1-cB
12 2uw1-a1-m1-cA 327 18 0.1124 0.0306 0.5556 6.3 2uw1-a1-m1-cA_2uw1-a1-m1-cB
13 6m10-a3-m3-cD 81 40 0.1461 0.1605 0.3250 8.6 6m10-a3-m1-cD_6m10-a3-m3-cD
14 6m10-a3-m1-cD 81 40 0.1461 0.1605 0.3250 8.6 6m10-a3-m1-cD_6m10-a3-m3-cD

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Reference:
Jacob Schwartz et al.

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