HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=77)
STIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAE
KITTVQAAIDYINGHQA

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	2fae-a8-m5-cB	77	77	1.0000	1.0000	1.0000	4.56e-50	2fae-a8-m1-cA_2fae-a8-m5-cB
2	2fae-a8-m1-cA	77	77	1.0000	1.0000	1.0000	4.56e-50	2fae-a8-m1-cA_2fae-a8-m5-cB
3	2fae-a3-m4-cB	77	77	1.0000	1.0000	1.0000	4.56e-50	2fae-a3-m1-cA_2fae-a3-m4-cB
4	2fae-a3-m1-cA	77	77	1.0000	1.0000	1.0000	4.56e-50	2fae-a3-m1-cA_2fae-a3-m4-cB
5	2fad-a3-m2-cB	77	77	1.0000	1.0000	1.0000	4.56e-50	2fad-a3-m1-cA_2fad-a3-m2-cB
6	2fad-a3-m1-cA	77	77	1.0000	1.0000	1.0000	4.56e-50	2fad-a3-m1-cA_2fad-a3-m2-cB
7	2x2b-a1-m2-cA	76	71	0.5844	0.5921	0.6338	4.45e-23	2x2b-a1-m1-cA_2x2b-a1-m2-cA
8	2x2b-a1-m1-cA	76	71	0.5844	0.5921	0.6338	4.45e-23	2x2b-a1-m1-cA_2x2b-a1-m2-cA
9	3gzl-a1-m2-cA	81	66	0.5065	0.4815	0.5909	1.28e-22	3gzl-a1-m1-cA_3gzl-a1-m2-cA
10	3gzl-a1-m1-cA	81	66	0.5065	0.4815	0.5909	1.28e-22	3gzl-a1-m1-cA_3gzl-a1-m2-cA
11	5zwt-a1-m1-cB	83	67	0.3766	0.3494	0.4328	4.68e-13	5zwt-a1-m1-cA_5zwt-a1-m1-cB
12	5zwt-a1-m1-cA	83	67	0.3766	0.3494	0.4328	4.68e-13	5zwt-a1-m1-cA_5zwt-a1-m1-cB
13	3lmo-a1-m2-cA	94	54	0.2338	0.1915	0.3333	3.98e-06	3lmo-a1-m1-cA_3lmo-a1-m2-cA
14	3lmo-a1-m1-cA	94	54	0.2338	0.1915	0.3333	3.98e-06	3lmo-a1-m1-cA_3lmo-a1-m2-cA
15	6sm4-a1-m1-cA	78	71	0.1818	0.1795	0.1972	2.5	6sm4-a1-m1-cB_6sm4-a1-m1-cA
16	3igh-a1-m2-cX	483	74	0.2857	0.0455	0.2973	2.5	3igh-a1-m1-cX_3igh-a1-m2-cX
17	3igh-a1-m1-cX	483	74	0.2857	0.0455	0.2973	2.5	3igh-a1-m1-cX_3igh-a1-m2-cX
18	6sm4-a1-m1-cB	77	71	0.1818	0.1818	0.1972	2.5	6sm4-a1-m1-cB_6sm4-a1-m1-cA
19	5nz8-a1-m1-cA	884	45	0.1818	0.0158	0.3111	6.9	5nz8-a1-m1-cA_5nz8-a1-m1-cB
20	5nz8-a1-m1-cB	974	45	0.1818	0.0144	0.3111	7.2	5nz8-a1-m1-cA_5nz8-a1-m1-cB
21	5nz7-a1-m1-cB	978	45	0.1818	0.0143	0.3111	7.2	5nz7-a1-m1-cB_5nz7-a1-m1-cA
22	5nz7-a1-m1-cA	984	45	0.1818	0.0142	0.3111	7.5	5nz7-a1-m1-cB_5nz7-a1-m1-cA
23	4bpg-a1-m2-cA	79	29	0.1429	0.1392	0.3793	8.4	4bpg-a1-m2-cB_4bpg-a1-m2-cA
24	4bpg-a1-m1-cA	79	29	0.1429	0.1392	0.3793	8.4	4bpg-a1-m2-cB_4bpg-a1-m1-cA
25	4bpg-a1-m2-cB	78	29	0.1429	0.1410	0.3793	8.7	4bpg-a1-m2-cB_4bpg-a1-m1-cA, 4bpg-a1-m2-cB_4bpg-a1-m2-cA

[Back]

Reference:
Jacob Schwartz et al.