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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
STKKKPLTQEQLEDARRLKAIYEKKKNELGLSQESVADKMGMGQSGVGALFNGINALNAY
NAALLAKILKVSVEEFSPSIAREIYEMYEAVS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1lmb-a1-m1-c4 92 92 1.0000 1.0000 1.0000 2.03e-62 1lmb-a1-m1-c3_1lmb-a1-m1-c4
2 3bdn-a1-m1-cB 234 92 1.0000 0.3932 1.0000 1.05e-60 3bdn-a1-m1-cA_3bdn-a1-m1-cB
3 3bdn-a1-m1-cA 234 92 1.0000 0.3932 1.0000 1.05e-60 3bdn-a1-m1-cA_3bdn-a1-m1-cB
4 1lrp-a2-m1-cC 89 89 0.9674 1.0000 1.0000 3.37e-60 1lrp-a2-m1-cB_1lrp-a2-m1-cC
5 1lrp-a2-m1-cB 89 89 0.9674 1.0000 1.0000 3.37e-60 1lrp-a2-m1-cB_1lrp-a2-m1-cC
6 7jvt-a1-m2-cD 199 90 0.9783 0.4523 1.0000 2.11e-59 7jvt-a1-m1-cD_7jvt-a1-m2-cD
7 7jvt-a1-m1-cD 199 90 0.9783 0.4523 1.0000 2.11e-59 7jvt-a1-m1-cD_7jvt-a1-m2-cD
8 1lmb-a1-m1-c3 87 87 0.9457 1.0000 1.0000 9.66e-59 1lmb-a1-m1-c3_1lmb-a1-m1-c4
9 3kz3-a1-m1-cB 80 78 0.8043 0.9250 0.9487 3.68e-48 3kz3-a1-m1-cA_3kz3-a1-m1-cB
10 3kz3-a1-m1-cA 80 78 0.8043 0.9250 0.9487 3.68e-48 3kz3-a1-m1-cA_3kz3-a1-m1-cB
11 2bji-a1-m1-cB 274 29 0.1413 0.0474 0.4483 1.5 2bji-a1-m1-cA_2bji-a1-m1-cB
12 2bji-a1-m1-cA 274 29 0.1413 0.0474 0.4483 1.5 2bji-a1-m1-cA_2bji-a1-m1-cB
13 4as5-a2-m1-cD 274 29 0.1413 0.0474 0.4483 1.5 4as5-a2-m1-cC_4as5-a2-m1-cD
14 4as5-a2-m1-cC 274 29 0.1413 0.0474 0.4483 1.5 4as5-a2-m1-cC_4as5-a2-m1-cD
15 1rpe-a1-m1-cR 63 29 0.1304 0.1905 0.4138 7.9 1rpe-a1-m1-cL_1rpe-a1-m1-cR
16 1rpe-a1-m1-cL 63 29 0.1304 0.1905 0.4138 7.9 1rpe-a1-m1-cL_1rpe-a1-m1-cR
17 2b5a-a2-m1-cD 76 66 0.1522 0.1842 0.2121 7.9 2b5a-a2-m1-cC_2b5a-a2-m1-cD
18 2b5a-a2-m1-cC 76 66 0.1522 0.1842 0.2121 7.9 2b5a-a2-m1-cC_2b5a-a2-m1-cD
19 4o67-a1-m1-cA 346 83 0.2283 0.0607 0.2530 9.7 4o67-a1-m1-cA_4o67-a1-m1-cB
20 1y7y-a1-m1-cA 69 47 0.1739 0.2319 0.3404 9.9 1y7y-a1-m1-cB_1y7y-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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