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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=69)
STLQKKIEEIAAKYKHSVVKKCCYDGARVNNDETCEQRAARISLGPRCIKAFTECCVVAS
QLRANISFK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4p39-a7-m1-cB 69 69 1.0000 1.0000 1.0000 3.62e-46 4p39-a7-m1-cB_4p39-a7-m3-cC
2 4p39-a5-m1-cB 69 69 1.0000 1.0000 1.0000 3.62e-46 4p39-a5-m1-cA_4p39-a5-m1-cB
3 4p39-a5-m1-cA 69 69 1.0000 1.0000 1.0000 3.62e-46 4p39-a5-m1-cA_4p39-a5-m1-cB
4 4p39-a7-m3-cC 69 68 0.9855 0.9855 1.0000 1.97e-45 4p39-a7-m1-cB_4p39-a7-m3-cC
5 3hqa-a3-m1-cA 66 65 0.9275 0.9697 0.9846 1.76e-41 3hqa-a3-m1-cB_3hqa-a3-m1-cA
6 3hqa-a3-m1-cB 64 64 0.9130 0.9844 0.9844 1.54e-40 3hqa-a3-m1-cB_3hqa-a3-m1-cA
7 3cu7-a3-m1-cB 1481 66 0.9275 0.0432 0.9697 1.76e-40 3cu7-a3-m1-cB_3cu7-a3-m1-cA
8 3cu7-a3-m1-cA 1625 66 0.9275 0.0394 0.9697 4.10e-40 3cu7-a3-m1-cB_3cu7-a3-m1-cA
9 4p3a-a6-m1-cD 69 61 0.6087 0.6087 0.6885 3.70e-27 4p3a-a6-m1-cC_4p3a-a6-m1-cD
10 4p3a-a6-m1-cC 68 61 0.6087 0.6176 0.6885 4.02e-27 4p3a-a6-m1-cC_4p3a-a6-m1-cD
11 4hw5-a3-m1-cB 77 61 0.3188 0.2857 0.3607 8.10e-06 4hw5-a3-m1-cA_4hw5-a3-m1-cB
12 4hw5-a3-m1-cA 77 61 0.3188 0.2857 0.3607 8.10e-06 4hw5-a3-m1-cA_4hw5-a3-m1-cB
13 2pgw-a1-m1-cH 363 17 0.1594 0.0303 0.6471 1.2 2pgw-a1-m1-cD_2pgw-a1-m1-cH, 2pgw-a1-m1-cF_2pgw-a1-m1-cH, 2pgw-a1-m1-cH_2pgw-a1-m1-cC
14 2pgw-a1-m1-cF 363 17 0.1594 0.0303 0.6471 1.2 2pgw-a1-m1-cF_2pgw-a1-m1-cH
15 2pgw-a1-m1-cD 363 17 0.1594 0.0303 0.6471 1.2 2pgw-a1-m1-cD_2pgw-a1-m1-cH
16 2pgw-a1-m1-cC 366 17 0.1594 0.0301 0.6471 1.2 2pgw-a1-m1-cH_2pgw-a1-m1-cC
17 2vyc-a2-m3-cJ 755 39 0.2319 0.0212 0.4103 2.6 2vyc-a2-m1-cG_2vyc-a2-m3-cJ, 2vyc-a2-m3-cI_2vyc-a2-m3-cJ
18 2vyc-a2-m3-cI 755 39 0.2319 0.0212 0.4103 2.6 2vyc-a2-m3-cI_2vyc-a2-m3-cJ
19 2vyc-a2-m1-cG 755 39 0.2319 0.0212 0.4103 2.6 2vyc-a2-m1-cG_2vyc-a2-m3-cJ
20 5och-a3-m1-cF 571 28 0.1594 0.0193 0.3929 3.2 5och-a3-m1-cF_5och-a3-m1-cE
21 5och-a3-m1-cE 574 28 0.1594 0.0192 0.3929 3.2 5och-a3-m1-cF_5och-a3-m1-cE
22 3qwe-a1-m2-cA 260 51 0.2609 0.0692 0.3529 4.3 3qwe-a1-m1-cA_3qwe-a1-m2-cA
23 3qwe-a1-m1-cA 260 51 0.2609 0.0692 0.3529 4.3 3qwe-a1-m1-cA_3qwe-a1-m2-cA
24 6hsp-a2-m2-cB 389 34 0.2029 0.0360 0.4118 7.2 6hsp-a2-m1-cB_6hsp-a2-m2-cB
25 6hsp-a2-m1-cB 389 34 0.2029 0.0360 0.4118 7.2 6hsp-a2-m1-cB_6hsp-a2-m2-cB

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Reference:
Jacob Schwartz et al.

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