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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
STPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREKEGVKYLKMERRIG
KLMRKFVLPENIEAISAISQDGVLTVTVNK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5ds1-a2-m1-cC 90 90 1.0000 1.0000 1.0000 1.50e-61 5ds1-a2-m1-cB_5ds1-a2-m1-cC
2 5ds1-a2-m1-cB 90 90 0.9889 0.9889 0.9889 4.32e-59 5ds1-a2-m1-cB_5ds1-a2-m1-cC
3 5ds2-a2-m1-cD 94 94 0.5111 0.4894 0.4894 7.09e-18 5ds2-a2-m1-cC_5ds2-a2-m1-cD
4 5ds2-a2-m1-cC 94 94 0.5111 0.4894 0.4894 7.09e-18 5ds2-a2-m1-cC_5ds2-a2-m1-cD
5 5j7n-a3-m3-cA 109 90 0.4000 0.3303 0.4000 2.40e-17 5j7n-a3-m1-cA_5j7n-a3-m3-cA
6 5j7n-a3-m1-cA 109 90 0.4000 0.3303 0.4000 2.40e-17 5j7n-a3-m1-cA_5j7n-a3-m3-cA
7 5j7n-a2-m2-cA 109 90 0.4000 0.3303 0.4000 2.40e-17 5j7n-a2-m1-cA_5j7n-a2-m2-cA
8 5j7n-a2-m1-cA 109 90 0.4000 0.3303 0.4000 2.40e-17 5j7n-a2-m1-cA_5j7n-a2-m2-cA
9 3gla-a1-m1-cA 97 90 0.3889 0.3608 0.3889 1.72e-15 3gla-a1-m1-cA_3gla-a1-m1-cB
10 3gla-a1-m1-cB 99 90 0.3889 0.3535 0.3889 1.81e-15 3gla-a1-m1-cA_3gla-a1-m1-cB
11 3w1z-a1-m4-cD 110 92 0.3889 0.3182 0.3804 7.62e-08 3w1z-a1-m4-cD_3w1z-a1-m2-cB, 3w1z-a1-m4-cD_3w1z-a1-m4-cA, 3w1z-a1-m4-cD_3w1z-a1-m4-cC
12 3w1z-a1-m4-cC 130 92 0.3889 0.2692 0.3804 9.73e-08 3w1z-a1-m4-cC_3w1z-a1-m1-cB, 3w1z-a1-m4-cD_3w1z-a1-m4-cC
13 3w1z-a1-m4-cA 134 92 0.3889 0.2612 0.3804 1.12e-07 3w1z-a1-m2-cA_3w1z-a1-m4-cA, 3w1z-a1-m4-cD_3w1z-a1-m4-cA
14 3w1z-a1-m2-cA 134 92 0.3889 0.2612 0.3804 1.12e-07 3w1z-a1-m2-cA_3w1z-a1-m4-cA
15 3w1z-a1-m1-cA 134 92 0.3889 0.2612 0.3804 1.12e-07 3w1z-a1-m1-cA_3w1z-a1-m4-cB
16 3w1z-a1-m4-cB 143 92 0.3889 0.2448 0.3804 1.45e-07 3w1z-a1-m1-cA_3w1z-a1-m4-cB, 3w1z-a1-m1-cB_3w1z-a1-m4-cB
17 3w1z-a1-m2-cB 143 92 0.3889 0.2448 0.3804 1.45e-07 3w1z-a1-m4-cD_3w1z-a1-m2-cB
18 3w1z-a1-m1-cB 143 92 0.3889 0.2448 0.3804 1.45e-07 3w1z-a1-m1-cB_3w1z-a1-m4-cB, 3w1z-a1-m4-cC_3w1z-a1-m1-cB
19 7oa6-a1-m1-cJ 116 101 0.4000 0.3103 0.3564 9.75e-07 7oa6-a1-m1-cJ_7oa6-a1-m1-cB, 7oa6-a1-m1-cJ_7oa6-a1-m1-cI
20 7oa6-a1-m1-cI 152 101 0.4000 0.2368 0.3564 1.36e-06 7oa6-a1-m1-cB_7oa6-a1-m1-cI, 7oa6-a1-m1-cJ_7oa6-a1-m1-cI
21 7oa6-a1-m1-cB 152 101 0.4000 0.2368 0.3564 1.36e-06 7oa6-a1-m1-cA_7oa6-a1-m1-cB, 7oa6-a1-m1-cB_7oa6-a1-m1-cI, 7oa6-a1-m1-cJ_7oa6-a1-m1-cB
22 7oa6-a1-m1-cA 152 101 0.4000 0.2368 0.3564 1.36e-06 7oa6-a1-m1-cA_7oa6-a1-m1-cB
23 3vqk-a1-m4-cD 107 90 0.3444 0.2897 0.3444 1.45e-06 3vqk-a1-m4-cB_3vqk-a1-m4-cD
24 3vqk-a1-m4-cC 107 90 0.3444 0.2897 0.3444 1.45e-06 3vqk-a1-m2-cC_3vqk-a1-m4-cC
25 3vqk-a1-m4-cB 107 90 0.3444 0.2897 0.3444 1.45e-06 3vqk-a1-m4-cB_3vqk-a1-m4-cD
26 3vqk-a1-m2-cC 107 90 0.3444 0.2897 0.3444 1.45e-06 3vqk-a1-m2-cC_3vqk-a1-m4-cC
27 2c20-a3-m1-cF 329 53 0.1667 0.0456 0.2830 1.2 2c20-a3-m1-cE_2c20-a3-m1-cF
28 2c20-a3-m1-cE 329 53 0.1667 0.0456 0.2830 1.2 2c20-a3-m1-cE_2c20-a3-m1-cF
29 4uxl-a1-m2-cA 288 53 0.2333 0.0729 0.3962 7.0 4uxl-a1-m1-cA_4uxl-a1-m2-cA
30 4uxl-a1-m1-cA 288 53 0.2333 0.0729 0.3962 7.0 4uxl-a1-m1-cA_4uxl-a1-m2-cA
31 5hmq-a3-m1-cE 612 28 0.1333 0.0196 0.4286 8.4 5hmq-a3-m1-cE_5hmq-a3-m1-cD
32 5hmq-a3-m1-cD 615 28 0.1333 0.0195 0.4286 8.4 5hmq-a3-m1-cE_5hmq-a3-m1-cD

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Reference:
Jacob Schwartz et al.

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