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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
STPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREKEGVKYLKMERRIG
KLMRKFVLPENNIEAISAISQDGVLTVTVN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5ds1-a2-m1-cB 90 90 1.0000 1.0000 1.0000 9.53e-62 5ds1-a2-m1-cB_5ds1-a2-m1-cC
2 5ds1-a2-m1-cC 90 90 0.9889 0.9889 0.9889 4.32e-59 5ds1-a2-m1-cB_5ds1-a2-m1-cC
3 5ds2-a2-m1-cD 94 92 0.5000 0.4787 0.4891 1.08e-17 5ds2-a2-m1-cC_5ds2-a2-m1-cD
4 5ds2-a2-m1-cC 94 92 0.5000 0.4787 0.4891 1.08e-17 5ds2-a2-m1-cC_5ds2-a2-m1-cD
5 5j7n-a3-m3-cA 109 88 0.3778 0.3119 0.3864 1.01e-16 5j7n-a3-m1-cA_5j7n-a3-m3-cA
6 5j7n-a3-m1-cA 109 88 0.3778 0.3119 0.3864 1.01e-16 5j7n-a3-m1-cA_5j7n-a3-m3-cA
7 5j7n-a2-m2-cA 109 88 0.3778 0.3119 0.3864 1.01e-16 5j7n-a2-m1-cA_5j7n-a2-m2-cA
8 5j7n-a2-m1-cA 109 88 0.3778 0.3119 0.3864 1.01e-16 5j7n-a2-m1-cA_5j7n-a2-m2-cA
9 3gla-a1-m1-cB 99 88 0.3667 0.3333 0.3750 7.27e-15 3gla-a1-m1-cA_3gla-a1-m1-cB
10 3gla-a1-m1-cA 97 88 0.3667 0.3402 0.3750 7.31e-15 3gla-a1-m1-cA_3gla-a1-m1-cB
11 7oa6-a1-m1-cJ 116 99 0.3889 0.3017 0.3535 2.94e-06 7oa6-a1-m1-cJ_7oa6-a1-m1-cB, 7oa6-a1-m1-cJ_7oa6-a1-m1-cI
12 3w1z-a1-m4-cD 110 90 0.3556 0.2909 0.3556 3.19e-06 3w1z-a1-m4-cD_3w1z-a1-m2-cB, 3w1z-a1-m4-cD_3w1z-a1-m4-cA, 3w1z-a1-m4-cD_3w1z-a1-m4-cC
13 7oa6-a1-m1-cI 152 99 0.3889 0.2303 0.3535 4.06e-06 7oa6-a1-m1-cB_7oa6-a1-m1-cI, 7oa6-a1-m1-cJ_7oa6-a1-m1-cI
14 7oa6-a1-m1-cB 152 99 0.3889 0.2303 0.3535 4.06e-06 7oa6-a1-m1-cA_7oa6-a1-m1-cB, 7oa6-a1-m1-cB_7oa6-a1-m1-cI, 7oa6-a1-m1-cJ_7oa6-a1-m1-cB
15 7oa6-a1-m1-cA 152 99 0.3889 0.2303 0.3535 4.06e-06 7oa6-a1-m1-cA_7oa6-a1-m1-cB
16 3w1z-a1-m4-cC 130 90 0.3556 0.2462 0.3556 4.08e-06 3w1z-a1-m4-cC_3w1z-a1-m1-cB, 3w1z-a1-m4-cD_3w1z-a1-m4-cC
17 3w1z-a1-m4-cA 134 90 0.3556 0.2388 0.3556 5.10e-06 3w1z-a1-m2-cA_3w1z-a1-m4-cA, 3w1z-a1-m4-cD_3w1z-a1-m4-cA
18 3w1z-a1-m2-cA 134 90 0.3556 0.2388 0.3556 5.10e-06 3w1z-a1-m2-cA_3w1z-a1-m4-cA
19 3w1z-a1-m1-cA 134 90 0.3556 0.2388 0.3556 5.10e-06 3w1z-a1-m1-cA_3w1z-a1-m4-cB
20 3w1z-a1-m4-cB 143 90 0.3556 0.2238 0.3556 6.55e-06 3w1z-a1-m1-cA_3w1z-a1-m4-cB, 3w1z-a1-m1-cB_3w1z-a1-m4-cB
21 3w1z-a1-m2-cB 143 90 0.3556 0.2238 0.3556 6.55e-06 3w1z-a1-m4-cD_3w1z-a1-m2-cB
22 3w1z-a1-m1-cB 143 90 0.3556 0.2238 0.3556 6.55e-06 3w1z-a1-m1-cB_3w1z-a1-m4-cB, 3w1z-a1-m4-cC_3w1z-a1-m1-cB
23 3vqk-a1-m4-cD 107 90 0.3444 0.2897 0.3444 8.76e-06 3vqk-a1-m4-cB_3vqk-a1-m4-cD
24 3vqk-a1-m4-cC 107 90 0.3444 0.2897 0.3444 8.76e-06 3vqk-a1-m2-cC_3vqk-a1-m4-cC
25 3vqk-a1-m4-cB 107 90 0.3444 0.2897 0.3444 8.76e-06 3vqk-a1-m4-cB_3vqk-a1-m4-cD
26 3vqk-a1-m2-cC 107 90 0.3444 0.2897 0.3444 8.76e-06 3vqk-a1-m2-cC_3vqk-a1-m4-cC
27 4uxl-a1-m2-cA 288 53 0.2333 0.0729 0.3962 7.0 4uxl-a1-m1-cA_4uxl-a1-m2-cA
28 4uxl-a1-m1-cA 288 53 0.2333 0.0729 0.3962 7.0 4uxl-a1-m1-cA_4uxl-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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