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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
STRGDLIRILGEIEEKMNELKMDGFNPDIILFGREAYNFLSNLLKKEMEEEGPFTHVSNI
KIEILEELGGDAVVIDSKVLGLVPGAAKRIKIIK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2pk8-a1-m2-cA 94 94 1.0000 1.0000 1.0000 3.02e-62 2pk8-a1-m1-cA_2pk8-a1-m2-cA
2 2pk8-a1-m1-cA 94 94 1.0000 1.0000 1.0000 3.02e-62 2pk8-a1-m1-cA_2pk8-a1-m2-cA
3 2ejv-a1-m2-cA 343 65 0.2021 0.0554 0.2923 0.036 2ejv-a1-m1-cA_2ejv-a1-m2-cA
4 2ejv-a1-m1-cA 343 65 0.2021 0.0554 0.2923 0.036 2ejv-a1-m1-cA_2ejv-a1-m2-cA
5 2dq4-a1-m2-cB 343 65 0.2021 0.0554 0.2923 0.036 2dq4-a1-m1-cA_2dq4-a1-m2-cB, 2dq4-a1-m2-cA_2dq4-a1-m2-cB
6 2dq4-a1-m2-cA 343 65 0.2021 0.0554 0.2923 0.036 2dq4-a1-m2-cA_2dq4-a1-m2-cB
7 2dq4-a1-m1-cA 343 65 0.2021 0.0554 0.2923 0.036 2dq4-a1-m1-cA_2dq4-a1-m2-cB
8 6unc-a6-m1-cC 276 96 0.2128 0.0725 0.2083 0.98 6unc-a6-m3-cD_6unc-a6-m1-cC
9 6unc-a6-m3-cD 272 96 0.2128 0.0735 0.2083 1.1 6unc-a6-m3-cD_6unc-a6-m1-cC
10 4m59-a1-m1-cB 683 25 0.1064 0.0146 0.4000 2.2 4m59-a1-m1-cB_4m59-a1-m1-cA
11 4m59-a1-m1-cA 687 25 0.1064 0.0146 0.4000 2.2 4m59-a1-m1-cB_4m59-a1-m1-cA
12 4zcc-a2-m1-cB 319 16 0.1064 0.0313 0.6250 4.7 4zcc-a2-m1-cB_4zcc-a2-m1-cC
13 4zcc-a2-m1-cC 321 16 0.1064 0.0312 0.6250 4.7 4zcc-a2-m1-cB_4zcc-a2-m1-cC
14 3kv5-a3-m1-cA 447 49 0.1596 0.0336 0.3061 4.7 3kv5-a3-m2-cD_3kv5-a3-m1-cA
15 3kv9-a2-m2-cA 366 49 0.1596 0.0410 0.3061 5.6 3kv9-a2-m1-cA_3kv9-a2-m2-cA
16 3kv9-a2-m1-cA 366 49 0.1596 0.0410 0.3061 5.6 3kv9-a2-m1-cA_3kv9-a2-m2-cA
17 3gkq-a2-m1-cF 373 32 0.1383 0.0349 0.4062 6.4 3gkq-a2-m1-cE_3gkq-a2-m1-cF
18 3gkq-a2-m1-cE 373 32 0.1383 0.0349 0.4062 6.4 3gkq-a2-m1-cE_3gkq-a2-m1-cF
19 2bka-a1-m2-cA 231 32 0.1277 0.0519 0.3750 7.4 2bka-a1-m1-cA_2bka-a1-m2-cA
20 2bka-a1-m1-cA 231 32 0.1277 0.0519 0.3750 7.4 2bka-a1-m1-cA_2bka-a1-m2-cA
21 4m57-a1-m2-cA 674 19 0.0851 0.0119 0.4211 8.5 4m57-a1-m1-cA_4m57-a1-m2-cA
22 4m57-a1-m1-cA 674 19 0.0851 0.0119 0.4211 8.5 4m57-a1-m1-cA_4m57-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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